Job Description P26616 Confidence 63.45% Date Thu Jan 5 11:43:01 GMT 2012 Rank 424 Aligned Residues 105 % Identity 18% Template c3fi9B_ PDB info PDB header:oxidoreductase Chain: B: PDB Molecule:malate dehydrogenase; PDBTitle: crystal structure of malate dehydrogenase from porphyromonas2 gingivalis Resolution 1.90 Å

Show / Hide SS confidence

Show / Hide Conservation and Alignment quality

		291	.	.	.	.	.	.	.	.	300	.	.		.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.		.	.
Predicted Secondary structure														.																																																																	.
Query SS confidence														.																																																																	.
Query Sequence		G	Q	L	S	E	K	K	I	V	F	L	G	.	A	G	S	A	G	C	G	I	A	E	M	I	I	S	Q	T	Q	R	E	G	L	S	E	E	A	A	R	Q	K	V	F	M	V	D	R	F	G	L	L	T	D	K	M	P	N	L	L	P	F	Q	T	K	L	V	Q	K	R	E	N	L	S	D	W	D	.	T	D
Query Conservation														.																																																																	.
Alig confidence														.																			.	.	.	.	.	.	.	.	.										.	.	.	.	.	.	.	.	.	.																			.
Template Conservation																																	.	.	.	.	.	.	.	.	.										.	.	.	.	.	.	.	.	.	.
Template Sequence		S	Y	L	T	E	E	K	L	T	I	V	G	A	A	G	M	I	G	S	N	M	A	Q	T	A	A	M	M	R	L	T	.	.	.	.	.	.	.	.	.	P	N	L	C	L	Y	D	P	F	.	.	.	.	.	.	.	.	.	.	A	V	G	L	E	G	V	A	E	E	I	R	H	C	G	F	E	G	L	N	L
Template Known Secondary structure				S		S	S						S	T	T	S													T	T			.	.	.	.	.	.	.	.	.	S							S		.	.	.	.	.	.	.	.	.	.																	T	T
Template Predicted Secondary structure																																	.	.	.	.	.	.	.	.	.										.	.	.	.	.	.	.	.	.	.
Template SS confidence
		2	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.										.	.	.	.	.	.	.	40	.											.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.
		369	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.	.	.											.	.	.	.	400	.	.	.	.	.	.	.	.	.	410	.	.		.	.	.	.	.	.	.
Predicted Secondary structure																													.	.	.	.	.	.	.	.	.	.																		.
Query SS confidence																													.	.	.	.	.	.	.	.	.	.																		.
Query Sequence		S	D	V	L	S	L	L	D	V	V	R	N	V	K	P	D	I	L	I	G	V	S	G	Q	T	G	L	.	.	.	.	.	.	.	.	.	.	F	T	E	E	I	I	R	E	M	H	K	H	C	P	R	P	I	.	V	M	P	L	S	N	P
Query Conservation																													.	.	.	.	.	.	.	.	.	.																		.
Alig confidence															.	.					.	.	.						.	.	.	.	.	.	.	.	.	.																		.
Template Conservation															.	.					.	.	.
Template Sequence		T	F	T	S	D	I	K	E	A	L	T	D	A	.	.	K	Y	I	V	.	.	.	S	S	G	G	T	R	E	D	L	L	K	G	N	A	E	I	A	A	Q	L	G	K	D	I	K	S	Y	C	P	D	C	K	H	V	I	I	I	F	N	P
Template Known Secondary structure					S							T	T		.	.					.	.	.																													T	T								S	S	S
Template Predicted Secondary structure															.	.					.	.	.
Template SS confidence
		63	.	.	.	.	.	.	70	.	.	.	.	.			.	.	.	.				80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.

No model constructed - rank, confidence too low

---

Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions