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Job DescriptionP26616
Confidence94.05%DateThu Jan 5 11:43:01 GMT 2012
Rank99Aligned Residues101
% Identity18%Templatec3donA_
PDB info PDB header:oxidoreductaseChain: A: PDB Molecule:shikimate dehydrogenase; PDBTitle: crystal structure of shikimate dehydrogenase from staphylococcus2 epidermidis
Resolution2.10 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   281........290.........300.........310.........320.........330.........340.........350.........360
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Query Sequence  TLIAASRAAGGQLSEKKIVFLGAGSAGCGIAEMIISQTQREGLSEEAARQKVFMVDRFGLLTDKMPNLLPFQTKLVQKRE
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Template Sequence  GYVNGLKQIYEGIEDAYILILGAGGASKGIANELYKIVRP. . . . . . . . . . TLTVANRT. . . . . . . . . . . . . . . . . MSRFN
Template Known Secondary structure  STTGGG



STT

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S
.................GGGGT
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   103......110.........120.........130.........140.. .......150 .....
 
   361........370.........380.........390.........400.........410.......
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Query Sequence  NLSDWDTDSDVLSLLDVVRNVKPDILIGVSGQTGLFTEEIIREMHKHCPRPIVMPLS
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Template Sequence  NWSLNINKINLSHAESHLDEF. . DIIINTT. PDSVISLN. . . . . . RLASHTLVSDIV
Template Known Secondary structure  T

S


TGGG
..S

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T......T

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   156...160.........170...... ...180... ......190. ........200...
 
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No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
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Lawrence Kelley, Benjamin Jefferys 
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