Job Description P26616 Confidence 73.19% Date Thu Jan 5 11:43:01 GMT 2012 Rank 298 Aligned Residues 99 % Identity 17% Template c3dl2A_ PDB info PDB header:structural genomics, unknown function Chain: A: PDB Molecule:ubiquitin-conjugating enzyme e2 variant 3; PDBTitle: hexagonal structure of the ldh domain of human ubiquitin-2 conjugating enzyme e2-like isoform a Resolution 2.10 Å

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		297	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		K	I	V	F	L	G	A	G	S	A	G	C	G	I	A	E	M	I	I	S	Q	T	Q	R	E	G	L	S	E	E	A	A	R	Q	K	V	F	M	V	D	R	F	G	L	L	T	D	K	M	P	N	L	L	P	F	Q	T	K	L	V	Q	K	R	E	N	L	S	D	W	D	T	D	S	D	V	L	S	L	L	D
Query Conservation
Alig confidence																										.	.	.	.	.	.	.	.	.																																				.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation																										.	.	.	.	.	.	.	.	.																																				.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		K	I	T	V	V	G	G	G	E	L	G	I	A	C	T	L	A	I	S	A	K	G	I	A	.	.	.	.	.	.	.	.	.	D	R	L	V	L	L	D	L	S	E	G	T	K	G	A	T	M	D	L	E	I	F	N	L	P	N	V	E	I	S	K	D	L	S	A	.	.	.	.	.	.	.	.	.	.	.	.
Template Known Secondary structure									S														T			.	.	.	.	.	.	.	.	.	S								S		G	G	G		T	T							T		T	T					S		G	G	G	.	.	.	.	.	.	.	.	.	.	.	.
Template Predicted Secondary structure																										.	.	.	.	.	.	.	.	.																																				.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		184	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.										.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.
		377	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.										.	.	.	.	.	.	400	.	.	.	.	.	.	.	.	.	410	.	.	.	.	.	.	.	.	.
Predicted Secondary structure																			.	.	.	.	.	.	.	.	.
Query SS confidence																			.	.	.	.	.	.	.	.	.
Query Sequence		V	V	R	N	V	K	P	D	I	L	I	G	V	S	G	Q	T	.	.	.	.	.	.	.	.	.	G	L	F	T	E	E	I	I	R	E	M	H	K	H	C	P	R	P	I	V	M	P	L	S	N	P
Query Conservation																			.	.	.	.	.	.	.	.	.
Alig confidence		.					.	.											.	.	.	.	.	.	.	.	.
Template Conservation		.					.	.
Template Sequence		.	S	A	H	S	.	.	K	V	V	I	F	T	V	N	S	Q	S	Y	L	D	V	V	Q	S	N	V	D	M	F	R	A	L	V	P	A	L	G	H	Y	S	Q	H	S	V	L	L	V	A	S	Q	P
Template Known Secondary structure		.	G	T	T		.	.	S																								T	T								S	T	T							S	S	S
Template Predicted Secondary structure		.					.	.
Template SS confidence
			243	.	.	.			.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions