Job Description P26616 Confidence 94.74% Date Thu Jan 5 11:43:01 GMT 2012 Rank 86 Aligned Residues 108 % Identity 19% Template c3d0oA_ PDB info PDB header:oxidoreductase Chain: A: PDB Molecule:l-lactate dehydrogenase 1; PDBTitle: crystal structure of lactate dehydrogenase from2 staphylococcus aureus Resolution 1.80 Å

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		293	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		L	S	E	K	K	I	V	F	L	G	A	G	S	A	G	C	G	I	A	E	M	I	I	S	Q	T	Q	R	E	G	L	S	E	E	A	A	R	Q	K	V	F	M	V	D	R	F	G	L	L	T	D	K	M	P	N	L	L	P	F	Q	T	K	L	V	Q	K	R	E	N	L	S	D	W	D	T	D	S	D	V	L
Query Conservation
Alig confidence																														.	.	.	.	.	.	.	.	.									.	.	.	.	.	.																					.	.
Template Conservation																														.	.	.	.	.	.	.	.	.									.	.	.	.	.	.																					.	.
Template Sequence		F	K	G	N	K	V	V	L	I	G	N	G	A	V	G	S	S	Y	A	F	S	L	V	N	Q	S	I	V	.	.	.	.	.	.	.	.	.	D	E	L	V	I	I	D	L	.	.	.	.	.	.	D	T	E	K	V	R	G	D	V	M	D	L	K	H	A	T	P	Y	S	P	.	.	T	T	V	R	V	K	A
Template Known Secondary structure													S															S		.	.	.	.	.	.	.	.	.	S							S	.	.	.	.	.	.																G	G	G	S	S	.	.	S
Template Predicted Secondary structure																														.	.	.	.	.	.	.	.	.									.	.	.	.	.	.																					.	.
Template SS confidence
		4	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.										.	.	.	.	.	.	.	.							40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.			60	.	.	.	.	.	.
		373	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.	.	.	.	.															.	.	400	.	.	.	.	.	.	.	.	.	410	.	.	.	.	.	.	.	.	.
Predicted Secondary structure																											.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence																											.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		S	L	L	D	V	V	R	N	V	K	P	D	I	L	I	G	V	S	G	Q	T	G	L	F	T	.	.	.	.	.	.	.	.	.	.	.	.	.	.	E	E	I	I	R	E	M	H	K	H	C	P	R	P	I	V	M	P	L	S	N	P
Query Conservation																											.	.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence											.	.															.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation											.	.
Template Sequence		G	E	Y	S	D	C	H	D	A	.	.	D	L	V	V	I	C	A	G	A	A	Q	K	P	G	E	T	R	L	D	L	V	S	K	N	L	K	I	F	K	S	I	V	G	E	V	M	A	S	K	F	D	G	I	F	L	V	A	T	N	P
Template Known Secondary structure				G	G	G	G	T	T		.	.	S												T	T																								T	T			S						S	S	S
Template Predicted Secondary structure											.	.
Template SS confidence
		67	.	.	70	.	.	.	.	.			.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions