Job Description P26616 Confidence 90.78% Date Thu Jan 5 11:43:01 GMT 2012 Rank 154 Aligned Residues 85 % Identity 24% Template c3cmmA_ PDB info PDB header:ligase/protein binding Chain: A: PDB Molecule:ubiquitin-activating enzyme e1 1; PDBTitle: crystal structure of the uba1-ubiquitin complex Resolution 2.70 Å

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		229	230	.	.	.	.	.	.	.	.		.		240	.	.	.	.	.	.	.	.	.	250												.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.
Predicted Secondary structure												.		.												.	.	.	.	.	.	.	.	.	.	.
Query SS confidence												.		.												.	.	.	.	.	.	.	.	.	.	.
Query Sequence		E	F	I	Q	A	V	K	Q	R	W	.	P	.	D	V	L	L	Q	F	E	D	F	A	Q	.	.	.	.	.	.	.	.	.	.	.	K	N	A	M	P	L	L	N	R	Y	R	N	E	I	C	S	F	N	D	D	I	Q	G	T	A	A	V	T	V	G	T	L	I	A	A	S	R	A	A	G	G	Q	L	S	E
Query Conservation												.		.												.	.	.	.	.	.	.	.	.	.	.
Alig confidence												.		.												.	.	.	.	.	.	.	.	.	.	.																							.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation																																																											.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		E	V	L	K	A	C	S	G	K	F	T	P	L	K	Q	F	M	Y	F	D	S	L	E	S	L	P	D	P	K	N	F	P	R	N	E	K	T	T	Q	P	V	N	S	R	Y	D	N	Q	I	A	V	F	G	L	D	F	Q	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	K	K	I	A	N
Template Known Secondary structure										B	S					S							G	G	G	S			T	T	T	S			S	T	T	T	T	S			S	S	T	T													.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.					T
Template Predicted Secondary structure																																																											.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		373	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.	.	.	.	.	.	.	400	.	.	.	.	.	.	.	.	.	410	.	.	.	.	.	.	.	.	.	420	.	.	.	.	.	.	.	.	.																			430	.	.	.	.
		296	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		K	K	I	V	F	L	G	A	G	S	A	G	C	G	I	A	E	M	I	I	S	Q	T	Q	R	E	G	L	S	E	E	A	A	R	Q	K	V	F	M	V	D
Query Conservation
Alig confidence																																.	.	.	.	.
Template Conservation																																.	.	.	.	.
Template Sequence		S	K	V	F	L	V	G	S	G	A	I	G	C	E	M	L	K	N	W	A	L	L	G	L	G	S	G	S	D	G	.	.	.	.	.	Y	I	V	V	T	D
Template Known Secondary structure										S														T	T	T		S	T	T		.	.	.	.	.
Template Predicted Secondary structure																																.	.	.	.	.
Template SS confidence
		435	.	.	.	.	440	.	.	.	.	.	.	.	.	.	450	.	.	.	.	.	.	.	.	.	460	.	.	.	.						.	.	.	.	.	470

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions