Job Description P26616 Confidence 89.59% Date Thu Jan 5 11:43:01 GMT 2012 Rank 165 Aligned Residues 206 % Identity 13% Template c3aerC_ PDB info PDB header:oxidoreductase Chain: C: PDB Molecule:light-independent protochlorophyllide reductase subunit n; PDBTitle: structure of the light-independent protochlorophyllide reductase2 catalyzing a key reduction for greening in the dark Resolution 2.80 Å

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		127	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.						.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.
Predicted Secondary structure																																															.	.	.	.	.
Query SS confidence																																															.	.	.	.	.
Query Sequence		I	S	Y	Q	N	R	H	N	M	D	D	I	L	Q	N	V	P	N	H	N	I	K	V	I	V	V	T	D	G	E	R	I	L	G	L	G	D	Q	G	I	G	G	M	G	I	.	.	.	.	.	P	I	G	K	L	S	L	Y	T	A	C	G	G	I	S	P	A	Y	T	L	P	V	V	L	D	V	G	T	N	N
Query Conservation																																															.	.	.	.	.
Alig confidence																		.	.	.																											.	.	.	.	.																											.	.	.	.
Template Conservation																		.	.	.																																																										.	.	.	.
Template Sequence		L	P	D	V	V	E	D	Q	C	L	S	L	L	T	Q	L	.	.	.	G	V	G	P	V	R	M	L	P	A	R	R	S	D	I	E	P	A	V	G	P	N	T	R	F	I	L	A	Q	P	F	L	G	E	T	T	G	A	L	E	R	R	G	A	K	R	I	A	A	P	F	P	F	G	E	E	G	.	.	.	.
Template Known Secondary structure																	T	.	.	.	T			S					S		S	S	G	G	G				B		T	T						S	S	T	T										T	T	T									S						.	.	.	.
Template Predicted Secondary structure																		.	.	.																																																										.	.	.	.
Template SS confidence
		179	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.				.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.
		202	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.
Predicted Secondary structure
Query SS confidence
Query Sequence		Q	Q	L	L	N	D	P	L	Y	M	G	W	R	N	P	R	I	T	D	D	E	Y	Y	E	F	V	D	E	F	I	Q	A	V	K	Q	R	W	P	D	V	L	L	Q	F	E	D	F	A	Q	K	N	A	M	P	L	L	N	R	Y	R	N	E	I	C	S	F	N	D	D	I	Q	G	T	A	A	V	T	V	G	T
Query Conservation
Alig confidence		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.															.	.	.	.	.	.	.	.	.	.	.													.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.															.	.	.	.	.	.	.	.	.	.	.													.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	T	T	L	W	L	K	A	V	A	D	A	Y	G	V	.	.	.	.	.	.	.	.	.	.	.	S	A	E	K	F	E	A	V	T	A	A	P	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	R	A	R
Template Known Secondary structure		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.											T	T	T		.	.	.	.	.	.	.	.	.	.	.													.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Predicted Secondary structure		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.															.	.	.	.	.	.	.	.	.	.	.													.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
																											252	.	.	.	.	.	.	.	260	.	.	.	.	.												.	.	.	.	270	.	.	.	.	.	.	.																.	.	280
		282	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.		.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360
Predicted Secondary structure																																				.
Query SS confidence																																				.
Query Sequence		L	I	A	A	S	R	A	A	G	G	Q	L	S	E	K	K	I	V	F	L	G	A	G	S	A	G	C	G	I	A	E	M	I	I	.	S	Q	T	Q	R	E	G	L	S	E	E	A	A	R	Q	K	V	F	M	V	D	R	F	G	L	L	T	D	K	M	P	N	L	L	P	F	Q	T	K	L	V	Q	K	R	E
Query Conservation																																				.
Alig confidence																																				.						.	.	.	.	.	.	.	.	.	.	.								.	.	.
Template Conservation																																										.	.	.	.	.	.	.	.	.	.	.								.	.	.
Template Sequence		A	K	K	A	I	A	A	H	L	E	T	L	T	G	K	S	L	F	M	F	P	D	S	Q	L	E	I	P	L	A	R	F	L	A	R	E	C	G	M	K	.	.	.	.	.	.	.	.	.	.	.	T	T	E	I	A	T	P	.	.	.	F	L	H	K	A	I	M	A	P	D	L	A	L	L	P	S	N	T	A
Template Known Secondary structure														T	T								S	S	S												T	T				.	.	.	.	.	.	.	.	.	.	.							S	.	.	.				T	T	T	T					T	T	S		T	T
Template Predicted Secondary structure																																										.	.	.	.	.	.	.	.	.	.	.								.	.	.
Template SS confidence
		281	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320												.	.	.	.	.	.	.				.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.
		361	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.	.	.	.	.	.	.	400	.	.	.	.	.	.	.	.	.	410	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		N	L	S	D	W	D	T	D	S	D	V	L	S	L	L	D	V	V	R	N	V	K	P	D	I	L	I	G	V	S	G	Q	T	G	L	F	T	E	E	I	I	R	E	M	H	K	H	C	P	R	P	I	V	M	P	L	S
Query Conservation
Alig confidence										.	.	.	.																			.	.	.	.	.	.	.	.	.
Template Conservation										.	.	.	.																			.	.	.	.	.	.	.	.	.
Template Sequence		L	T	E	G	Q	D	L	E	.	.	.	.	A	Q	L	D	R	H	E	A	I	N	P	D	L	T	V	C	G	L	.	.	.	.	.	.	.	.	.	G	L	A	N	P	L	E	A	K	G	H	A	T	K	W	A	I	E
Template Known Secondary structure										.	.	.	.												S							.	.	.	.	.	.	.	.	.								T	T	T						S	G	G
Template Predicted Secondary structure										.	.	.	.																			.	.	.	.	.	.	.	.	.
Template SS confidence
		347	.	.	350	.	.	.	.					.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.										.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions