Job Description P26616 Confidence 81.90% Date Thu Jan 5 11:43:01 GMT 2012 Rank 226 Aligned Residues 168 % Identity 14% Template c2yfqA_ PDB info PDB header:oxidoreductase Chain: A: PDB Molecule:nad-specific glutamate dehydrogenase; PDBTitle: crystal structure of glutamate dehydrogenase from2 peptoniphilus asaccharolyticus Resolution 2.94 Å

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		213	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.		.	240	.	.	.	.	.	.	.	.	.	250			.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.																	.	270	.	.	.
Predicted Secondary structure																												.													.	.																			.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence																												.													.	.																			.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		W	R	N	P	R	I	T	D	D	E	Y	Y	E	F	V	D	E	F	I	Q	A	V	K	Q	R	W	.	P	D	V	L	L	Q	F	E	D	F	A	Q	.	.	K	N	A	M	P	L	L	N	R	Y	R	N	E	I	C	S	F	N	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	D	D	I	Q	G
Query Conservation																												.													.	.																			.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence																												.													.	.																			.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		V	D	P	A	E	L	S	E	R	E	L	E	Q	L	S	R	G	W	V	R	G	L	Y	K	Y	L	G	D	R	I	D	I	P	A	P	D	V	N	T	N	G	Q	I	M	S	W	F	V	D	E	Y	V	K	L	N	G	E	R	M	D	I	G	T	F	T	G	K	P	V	A	F	G	G	S	E	G	R	N	E	A
Template Known Secondary structure				G	G	G	S																	G	G	G		B	T	T	T							T	T																	T	T	T				G	G	G	S		S			G	G	G	T			T	T		T	T
Template Predicted Secondary structure
Template SS confidence
		111	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190
		274	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.						.	.	.	340	.	.	.	.	.	.	.	.
Predicted Secondary structure																																																																	.	.	.	.	.
Query SS confidence																																																																	.	.	.	.	.
Query Sequence		T	A	A	V	T	V	G	T	L	I	A	A	S	R	A	A	G	G	Q	L	S	E	K	K	I	V	F	L	G	A	G	S	A	G	C	G	I	A	E	M	I	I	S	Q	T	Q	R	E	G	L	S	E	E	A	A	R	Q	K	V	F	M	V	D	.	.	.	.	.	R	F	G	L	L	T	D	K	M	P	N	L
Query Conservation																																																																	.	.	.	.	.
Alig confidence																																																	.	.	.	.	.	.	.	.	.	.							.	.	.	.	.							.
Template Conservation																																																	.	.	.	.	.	.	.	.	.	.																		.
Template Sequence		T	G	F	G	V	A	V	V	V	R	E	S	A	K	R	F	G	I	K	M	E	D	A	K	I	A	V	Q	G	F	G	N	V	G	T	F	T	V	K	N	I	E	R	Q	G	G	K	.	.	.	.	.	.	.	.	.	.	V	C	A	I	A	E	W	D	R	N	E	G	N	Y	A	L	Y	.	N	E	N	G	I
Template Known Secondary structure																	T	T			G	G	G	S								S													T	T			.	.	.	.	.	.	.	.	.	.						B			S	S	S		S	B			B	.		S	S
Template Predicted Secondary structure																																																	.	.	.	.	.	.	.	.	.	.																		.
Template SS confidence
		191	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.											.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.		.	.	.	.	.
		349	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.	.	.	.	.	.	.	400	.	.	.	.	.	.	.	.	.	410	.	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		L	P	F	Q	T	K	L	V	Q	K	R	E	N	L	S	D	W	D	T	D	S	D	V	L	S	L	L	D	V	V	R	N	V	K	P	D	I	L	I	G	V	S	G	Q	T	G	L	F	T	E	E	I	I	R	E	M	H	K	H	C	P	R	P	I	V	M	P	L	S	N
Query Conservation
Alig confidence							.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																	.													.	.	.	.
Template Conservation							.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																	.													.	.	.	.
Template Sequence		D	F	K	E	L	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	L	A	Y	K	E	A	N	K	T	I	I	V	P	A	A	L	.	E	N	V	I	T	G	E	R	A	K	T	I	.	.	.	.	N	A	K	L	V	C	E	A	A	N
Template Known Secondary structure							.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.															S		.	S	S		S						T	T		.	.	.	.			S						S	S
Template Predicted Secondary structure							.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																	.													.	.	.	.
Template SS confidence
		260	.	.	.	.																							.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280		.	.	.	.	.	.	.	.	.	290	.	.					.	.	.	.	.	.	.	300	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions