Job Description P26616 Confidence 85.07% Date Thu Jan 5 11:43:01 GMT 2012 Rank 208 Aligned Residues 102 % Identity 16% Template c2pi1C_ PDB info PDB header:oxidoreductase Chain: C: PDB Molecule:d-lactate dehydrogenase; PDBTitle: crystal structure of d-lactate dehydrogenase from aquifex2 aeolicus complexed with nad and lactic acid Resolution 2.12 Å

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		272	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.																				290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.
Predicted Secondary structure																				.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence																				.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		Q	G	T	A	A	V	T	V	G	T	L	I	A	A	S	R	A	A	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	G	G	Q	L	S	E	K	K	I	V	F	L	G	A	G	S	A	G	C	G	I	A	E	M	I	I	S	Q	T	Q	R	E	G	L	S	E	E	A	A	R	Q	K	V
Query Conservation																				.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence																				.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																																.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation																																																																						.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		E	S	V	A	E	H	T	F	A	X	I	L	T	L	V	K	R	L	K	R	I	E	D	R	V	K	K	L	N	F	S	Q	D	S	E	I	L	A	R	E	L	N	R	L	T	L	G	V	I	G	T	G	R	I	G	S	R	V	A	X	Y	G	L	A	F	G	X	K	.	.	.	.	.	.	.	.	.	.	.	.
Template Known Secondary structure																	T	T										T	T						G	G	G					G	G	G	S								S													T	T			.	.	.	.	.	.	.	.	.	.	.	.
Template Predicted Secondary structure																																																																						.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		99	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.
		333	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390					.	.	.	.	.	.	.	.	.	400	.	.	.	.	.	.	.
Predicted Secondary structure																																																												.	.	.	.
Query SS confidence																																																												.	.	.	.
Query Sequence		F	M	V	D	R	F	G	L	L	T	D	K	M	P	N	L	L	P	F	Q	T	K	L	V	Q	K	R	E	N	L	S	D	W	D	T	D	S	D	V	L	S	L	L	D	V	V	R	N	V	K	P	D	I	L	I	G	V	S	.	.	.	.	G	Q	T	G	L	F	T	E	E	I	I	R	E	M	H	K	H
Query Conservation																																																												.	.	.	.
Alig confidence		.	.	.	.	.	.	.																				.	.	.	.	.	.	.	.	.	.	.	.	.											.	.								.	.	.	.
Template Conservation		.	.	.	.	.	.	.																				.	.	.	.	.	.	.	.	.	.	.	.	.											.	.
Template Sequence		.	.	.	.	.	.	.	V	L	C	Y	D	V	V	K	R	E	D	L	K	E	K	G	C	V	Y	.	.	.	.	.	.	.	.	.	.	.	.	.	T	S	L	D	E	L	L	K	E	S	.	.	D	V	I	S	L	H	V	P	Y	T	K	E	T	H	H	X	I	N	E	E	R	I	S	L	X	K	D	G
Template Known Secondary structure		.	.	.	.	.	.	.						S	S									T				.	.	.	.	.	.	.	.	.	.	.	.	.											.	.	S										T	T	T	T	T		B								S		T	T
Template Predicted Secondary structure		.	.	.	.	.	.	.																				.	.	.	.	.	.	.	.	.	.	.	.	.											.	.
Template SS confidence
									167	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.														.	.	.	.	190	.	.	.	.	.			.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions