Job Description P26616 Confidence 95.03% Date Thu Jan 5 11:43:01 GMT 2012 Rank 82 Aligned Residues 129 % Identity 18% Template c2j6iC_ PDB info PDB header:oxidoreductase Chain: C: PDB Molecule:formate dehydrogenase; PDBTitle: candida boidinii formate dehydrogenase (fdh) c-terminal2 mutant Resolution 1.55 Å

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		257	.	.	260	.	.	.				.	.	.	.	.	.	270	.	.	.	.	.	.	.	.				.	280	.	.	.	.	.	.	.																					.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310
Predicted Secondary structure									.	.	.																.	.	.										.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence									.	.	.																.	.	.										.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		L	N	R	Y	R	N	E	.	.	.	I	C	S	F	N	D	D	I	Q	G	T	A	A	V	T	.	.	.	V	G	T	L	I	A	A	S	R	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	A	A	G	G	Q	L	S	E	K	K	I	V	F	L	G	A	G	S	A	G	C	G	I
Query Conservation									.	.	.																.	.	.										.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence									.	.	.																.	.	.										.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		L	D	Y	I	N	Q	T	G	K	K	I	S	V	L	E	V	T	G	S	N	V	V	S	V	A	E	H	V	V	M	T	M	L	V	L	V	R	N	F	V	P	A	H	E	Q	I	I	N	H	D	W	E	V	A	A	I	A	K	D	A	Y	D	I	E	G	K	T	I	A	T	I	G	A	G	R	I	G	Y	R	V
Template Known Secondary structure									T									T	T	S	S																	T	T										T	T									T	T				S	T	T									S
Template Predicted Secondary structure
Template SS confidence
		100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.
		311	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.
Predicted Secondary structure																																																																																.	.
Query SS confidence																																																																																.	.
Query Sequence		A	E	M	I	I	S	Q	T	Q	R	E	G	L	S	E	E	A	A	R	Q	K	V	F	M	V	D	R	F	G	L	L	T	D	K	M	P	N	L	L	P	F	Q	T	K	L	V	Q	K	R	E	N	L	S	D	W	D	T	D	S	D	V	L	S	L	L	D	V	V	R	N	V	K	P	D	I	L	I	G	.	.
Query Conservation																																																																																.	.
Alig confidence												.	.	.	.	.	.	.	.	.	.	.								.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																											.	.						.	.
Template Conservation												.	.	.	.	.	.	.	.	.	.	.								.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																											.	.
Template Sequence		L	E	R	L	V	P	F	N	P	K	.	.	.	.	.	.	.	.	.	.	.	E	L	L	Y	Y	D	Y	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	Q	A	L	P	K	D	A	E	E	K	V	G	A	R	R	V	E	N	I	E	E	L	V	A	Q	A	.	.	D	I	V	T	V	N	A
Template Known Secondary structure						G	G	G			S	.	.	.	.	.	.	.	.	.	.	.							S	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	S											T					S	S									.	.	S
Template Predicted Secondary structure												.	.	.	.	.	.	.	.	.	.	.								.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																											.	.
Template SS confidence
		180	.	.	.	.	.	.	.	.	.												190	.	.	.	.	.	.																		.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.			.	.	.	.	.	.	.
				389	390	.	.	.	.	.	.	.	.	.	400	.	.	.	.	.	.	.	.	.	410	.	.	.	.	.	.	.	.
Predicted Secondary structure		.	.
Query SS confidence		.	.
Query Sequence		.	.	V	S	G	Q	T	G	L	F	T	E	E	I	I	R	E	M	H	K	H	C	P	R	P	I	V	M	P	L	S	N
Query Conservation		.	.
Alig confidence		.	.																					.	.	.
Template Conservation																								.	.	.
Template Sequence		P	L	H	A	G	T	K	G	L	I	N	K	E	L	L	S	K	F	K	K	G	A	.	.	.	W	L	V	N	T	A	R
Template Known Secondary structure				S	T	T	T	T	T		B						T	T	S		T	T		.	.	.						S
Template Predicted Secondary structure																								.	.	.
Template SS confidence
		230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.				.	.	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions