Job Description P26616 Confidence 57.73% Date Thu Jan 5 11:43:01 GMT 2012 Rank 485 Aligned Residues 138 % Identity 20% Template c2dt8A_ PDB info PDB header:lipid binding protein Chain: A: PDB Molecule:degv family protein; PDBTitle: fatty acid binding of a degv family protein from thermus thermophilus Resolution 1.48 Å

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		148	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		K	V	I	V	V	T	D	G	E	R	I	L	G	L	G	D	Q	G	I	G	G	M	G	I	P	I	G	K	L	S	L	Y	T	A	C	G	G	I	S	P	A	Y	T	L	P	V	V	L	D	V	G	T	N	N	Q	Q	L	L	N	D	P	L	Y	M	G	W	R	N	P	R	I	T	D	D	E	Y	Y	E	F	V
Query Conservation
Alig confidence												.	.	.	.	.	.	.	.	.	.	.	.											.	.	.	.				.	.	.									.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation												.	.	.	.	.	.	.	.	.	.	.	.											.	.	.	.				.	.	.									.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		R	I	T	L	V	T	D	S	T	S	.	.	.	.	.	.	.	.	.	.	.	.	D	L	P	Q	D	L	R	G	R	L	.	.	.	.	G	V	R	.	.	.	V	V	P	L	Y	V	N	L	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	S	G	A	I	Y	R	D	W	E
Template Known Secondary structure									G	G	G	.	.	.	.	.	.	.	.	.	.	.	.								T	T	T	.	.	.	.	T			.	.	.									.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	T	T					T	T	T
Template Predicted Secondary structure												.	.	.	.	.	.	.	.	.	.	.	.											.	.	.	.				.	.	.									.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		2	.	.	.	.	.	.	.	10	.													.	.	.	.	.	.	.	.	20	.					.	.	.				.	.	.	.	.	30	.	.																						.	.	.	.	.	.	.	40	.
						228	.	230	.	.	.	.	.	.			.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.		.	.	.	.	.	300
Predicted Secondary structure		.	.	.	.										.	.																																																											.
Query SS confidence		.	.	.	.										.	.																																																											.
Query Sequence		.	.	.	.	D	E	F	I	Q	A	V	K	Q	.	.	R	W	P	D	V	L	L	Q	F	E	D	F	A	Q	K	N	A	M	P	L	L	N	R	Y	R	N	E	I	C	S	F	N	D	D	I	Q	G	T	A	A	V	T	V	G	T	L	I	A	A	S	R	A	A	G	G	Q	L	S	.	E	K	K	I	V	F
Query Conservation		.	.	.	.										.	.																																																											.
Alig confidence		.	.	.	.										.	.					.	.	.	.	.	.	.																																																.
Template Conservation																					.	.	.	.	.	.	.
Template Sequence		E	I	T	P	T	E	I	F	Q	K	V	R	E	G	A	A	F	P	T	.	.	.	.	.	.	.	T	S	Q	P	S	P	E	D	F	A	R	V	Y	R	E	A	L	E	E	A	D	H	V	L	S	L	H	I	S	G	K	L	S	G	T	V	Q	S	A	E	L	A	A	Q	E	F	P	G	R	V	T	V	V	D
Template Known Secondary structure		T												T	T						.	.	.	.	.	.	.																	T	T	S		S							S		T	T	T		T										T	T	S	T	T	S
Template Predicted Secondary structure																					.	.	.	.	.	.	.
Template SS confidence
		42	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60								.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.
		301	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		L	G	A	G	S	A	G	C	G	I	A	E	M	I	I	S	Q	T	Q	R	E	G	L	S	E	E	A	A	R	Q	K	V
Query Conservation
Alig confidence
Template Conservation
Template Sequence		T	Q	A	A	S	L	G	V	G	X	X	V	L	R	A	K	E	L	L	E	E	G	Q	S	L	E	A	V	L	A	E	L
Template Known Secondary structure			S			T																	T
Template Predicted Secondary structure
Template SS confidence
		115	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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