Job Description P26616 Confidence 89.93% Date Thu Jan 5 11:43:01 GMT 2012 Rank 161 Aligned Residues 127 % Identity 18% Template c2dfdD_ PDB info PDB header:oxidoreductase Chain: D: PDB Molecule:malate dehydrogenase; PDBTitle: crystal structure of human malate dehydrogenase type 2 Resolution 1.90 Å

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		297	.	.	300	.	.	.		.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.
Predicted Secondary structure									.
Query SS confidence									.
Query Sequence		K	I	V	F	L	G	A	.	G	S	A	G	C	G	I	A	E	M	I	I	S	Q	T	Q	R	E	G	L	S	E	E	A	A	R	Q	K	V	F	M	V	D	R	F	G	L	L	T	D	K	M	P	N	L	L	P	F	Q	T	K	L	V	Q	K	R	E	N	L	S	D	W	D	T	D	S	D	V	L	S	L	L
Query Conservation									.
Alig confidence									.																		.	.	.	.	.	.	.	.	.												.	.	.	.	.	.	.	.	.
Template Conservation																											.	.	.	.	.	.	.	.	.												.	.	.	.	.	.	.	.	.
Template Sequence		K	V	A	V	L	G	A	S	G	G	I	G	Q	P	L	S	L	L	L	K	N	S	P	L	V	.	.	.	.	.	.	.	.	.	S	R	L	T	L	Y	D	I	A	H	T	.	.	.	.	.	.	.	.	.	P	G	V	A	A	D	L	S	H	I	E	T	K	A	A	V	K	G	Y	L	G	P	E	Q	L	P
Template Known Secondary structure							T	T	T	S	T	T												T	T		.	.	.	.	.	.	.	.	.								S	S	S		.	.	.	.	.	.	.	.	.								T	T	S	S	S	S								S	G	G	G
Template Predicted Secondary structure																											.	.	.	.	.	.	.	.	.												.	.	.	.	.	.	.	.	.
Template SS confidence
		8	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.										.	.	.	.	.	.	.	40	.	.	.										.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.
		376	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.	.	.	.			.													.	.	400	.	.	.	.	.	.	.	.	.	410	.	.	.	.	.	.	.	.	.	420	.	.	.	.	.	.	.	.	.	430	.	.	.	.	.	.				.	.
Predicted Secondary structure																							.	.		.	.	.	.	.	.	.	.	.	.	.	.																																								.	.	.
Query SS confidence																							.	.		.	.	.	.	.	.	.	.	.	.	.	.																																								.	.	.
Query Sequence		D	V	V	R	N	V	K	P	D	I	L	I	G	V	S	G	Q	T	G	L	F	.	.	T	.	.	.	.	.	.	.	.	.	.	.	.	E	E	I	I	R	E	M	H	K	H	C	P	R	P	I	V	M	P	L	S	N	P	T	S	R	V	E	A	T	P	Q	D	I	I	A	W	T	E	G	.	.	.	N	A
Query Conservation																							.	.		.	.	.	.	.	.	.	.	.	.	.	.																																								.	.	.
Alig confidence								.	.														.	.		.	.	.	.	.	.	.	.	.	.	.	.																																								.	.	.
Template Conservation								.	.
Template Sequence		D	C	L	K	G	C	.	.	D	V	V	V	I	P	A	G	V	P	R	K	P	G	M	T	R	D	D	L	F	N	T	N	A	T	I	V	A	T	L	T	A	A	C	A	Q	H	C	P	E	A	M	I	C	V	I	A	N	P	V	N	S	T	I	P	I	T	A	E	V	F	K	K	H	G	V	Y	N	P	N	K
Template Known Secondary structure					T	T		.	.	S							S					T	T			G	G	G	G																				T	T	S						S	S																T	T				T	T	S
Template Predicted Secondary structure								.	.
Template SS confidence
		70	.	.	.	.	.			.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.
		439	440	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		L	V	A	T	G
Query Conservation
Alig confidence
Template Conservation
Template Sequence		I	F	G	V	T
Template Known Secondary structure
Template Predicted Secondary structure
Template SS confidence
		148	.	150	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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