Job Description P26616 Confidence 92.22% Date Thu Jan 5 11:43:01 GMT 2012 Rank 133 Aligned Residues 98 % Identity 26% Template c2d0iC_ PDB info PDB header:oxidoreductase Chain: C: PDB Molecule:dehydrogenase; PDBTitle: crystal structure ph0520 protein from pyrococcus horikoshii ot3 Resolution 1.95 Å

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		274	.	.	.	.	.	280	.	.	.	.	.	.	.	.																									.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.
Predicted Secondary structure																	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence																	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		T	A	A	V	T	V	G	T	L	I	A	A	S	R	A	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	A	G	G	Q	L	S	E	K	K	I	V	F	L	G	A	G	S	A	G	C	G	I	A	E	M	I	I	S	Q	T	Q	R	E	G	L	S	E	E	A	A	R
Query Conservation																	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence																	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																																	.	.	.	.	.	.	.	.	.
Template Conservation																																																																									.	.	.	.	.	.	.	.	.
Template Sequence		V	A	E	F	T	V	G	L	I	I	N	L	M	R	K	I	H	Y	A	D	K	F	I	R	R	G	E	W	E	S	H	A	K	I	W	T	G	F	K	R	I	E	S	L	Y	G	K	K	V	G	I	L	G	M	G	A	I	G	K	A	I	A	R	R	L	I	P	F	G	V	K	.	.	.	.	.	.	.	.	.
Template Known Secondary structure																										T	T										T	T	S						S	T	T									S											G	G	G	T			.	.	.	.	.	.	.	.	.
Template Predicted Secondary structure																																																																									.	.	.	.	.	.	.	.	.
Template SS confidence
		101	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.
		330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.					.	390	.	.	.	.	.	.	.	.	.	400	.	.	.	.
Predicted Secondary structure																																																													.	.	.	.
Query SS confidence																																																													.	.	.	.
Query Sequence		Q	K	V	F	M	V	D	R	F	G	L	L	T	D	K	M	P	N	L	L	P	F	Q	T	K	L	V	Q	K	R	E	N	L	S	D	W	D	T	D	S	D	V	L	S	L	L	D	V	V	R	N	V	K	P	D	I	L	I	G	.	.	.	.	V	S	G	Q	T	G	L	F	T	E	E	I	I	R	E	M
Query Conservation																																																													.	.	.	.
Alig confidence		.	.							.	.	.	.	.	.	.															.	.	.	.	.	.	.	.	.	.	.	.	.											.	.						.	.	.	.
Template Conservation		.	.							.	.	.	.	.	.	.															.	.	.	.	.	.	.	.	.	.	.	.	.											.	.
Template Sequence		.	.	L	Y	Y	W	S	R	.	.	.	.	.	.	.	H	R	K	V	N	V	E	K	E	L	K	A	R	Y	.	.	.	.	.	.	.	.	.	.	.	.	.	M	D	I	D	E	L	L	E	K	S	.	.	D	I	V	I	L	A	L	P	L	T	R	D	T	Y	H	I	I	N	E	E	R	V	K	K	L
Template Known Secondary structure		.	.						T	.	.	.	.	.	.	.	T														.	.	.	.	.	.	.	.	.	.	.	.	.											.	.	S										T	T	T	T	T	T	B								T
Template Predicted Secondary structure		.	.							.	.	.	.	.	.	.															.	.	.	.	.	.	.	.	.	.	.	.	.											.	.
Template SS confidence
				172	.	.	.	.	.								.	.	180	.	.	.	.	.	.	.	.	.	190	.														.	.	.	.	.	.	.	.	200	.			.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions