Job Description P26616 Confidence 97.12% Date Thu Jan 5 11:43:01 GMT 2012 Rank 27 Aligned Residues 195 % Identity 14% Template c2bmaA_ PDB info PDB header:oxidoreductase Chain: A: PDB Molecule:glutamate dehydrogenase (nadp+); PDBTitle: the crystal structure of plasmodium falciparum glutamate2 dehydrogenase, a putative target for novel antimalarial3 drugs Resolution 2.7 Å

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		216	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.		.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.			.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.															.	.	.	.	.
Predicted Secondary structure																									.																		.	.																			.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence																									.																		.	.																			.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		P	R	I	T	D	D	E	Y	Y	E	F	V	D	E	F	I	Q	A	V	K	Q	R	W	.	P	D	V	L	L	Q	F	E	D	F	A	Q	K	N	A	M	P	.	.	L	L	N	R	Y	R	N	E	I	C	S	F	N	D	D	I	Q	G	.	.	.	.	.	.	.	.	.	.	.	.	.	.	T	A	A	V	T
Query Conservation																									.																		.	.																			.	.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence																									.																		.	.																			.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		K	G	K	S	D	N	E	I	L	K	F	C	Q	A	F	M	N	E	L	Y	R	H	I	G	P	C	T	D	V	P	A	G	D	I	G	V	G	G	R	E	I	G	Y	L	Y	G	Q	Y	K	K	I	V	N	S	F	N	G	T	L	T	G	K	N	V	K	W	G	G	S	N	L	R	V	E	A	T	G	Y	G	L
Template Known Secondary structure		T	T																		G	G	G		B	T	T	T							S	S																					S		S	S	S	S			G	G	G	T			T	T	T	T	T
Template Predicted Secondary structure
Template SS confidence
		133	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.
		279	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		V	G	T	L	I	A	A	S	R	A	A	G	G	Q	L	S	E	K	K	I	V	F	L	G	A	G	S	A	G	C	G	I	A	E	M	I	I	S	Q	T	Q	R	E	G	L	S	E	E	A	A	R	Q	K	V	F	M	V	D	R	F	G	L	L	T	D	K	M	P	N	L	L	P	F	Q	T	K	L	V	Q	K
Query Conservation
Alig confidence																																												.	.	.	.	.	.	.	.	.	.
Template Conservation																																												.	.	.	.	.	.	.	.	.	.
Template Sequence		V	Y	F	V	L	E	V	L	K	S	L	N	I	P	V	E	K	Q	T	A	V	V	S	G	S	G	N	V	A	L	Y	C	V	Q	K	L	L	H	L	N	V	K	.	.	.	.	.	.	.	.	.	.	V	L	T	L	S	D	S	N	G	Y	V	Y	E	P	N	G	F	T	H	E	N	L	E	F	L	I	D	L
Template Known Secondary structure											T	T	T			G	G	G								S	S													T	T			.	.	.	.	.	.	.	.	.	.							T	T						S	S
Template Predicted Secondary structure																																												.	.	.	.	.	.	.	.	.	.
Template SS confidence
		214	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.											.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.
		359	360	.	.	.	.	.	.	.	.	.	370	.	.	.							.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.	.	.	.	.	.	.	400	.	.	.	.	.	.	.	.	.	410	.	.	.	.	.	.	.	.	.	420	.
Predicted Secondary structure																	.	.	.	.	.	.
Query SS confidence																	.	.	.	.	.	.
Query Sequence		R	E	N	L	S	D	W	D	T	D	S	D	V	L	S	.	.	.	.	.	.	L	L	D	V	V	R	N	V	K	P	D	I	L	I	G	V	S	G	Q	T	G	L	F	T	E	E	I	I	R	E	M	H	K	H	C	P	R	P	I	V	M	P	L	S	N	P	T	S
Query Conservation																	.	.	.	.	.	.
Alig confidence																	.	.	.	.	.	.																	.
Template Conservation																																							.
Template Sequence		K	E	E	K	K	G	R	I	K	E	Y	L	N	H	S	S	T	A	K	Y	F	P	N	E	K	P	W	G	V	P	C	T	L	A	F	P	C	.	A	T	Q	N	D	V	D	L	D	Q	A	K	L	L	Q	K	N	G	C	I	L	V	G	E	G	A	N	M	P	S	T
Template Known Secondary structure			T	T	T	T			G	G	G	G	G	G	T		S	S					S	S			T	T	S	S			S						.	S	S	T	T		B		S									T	T								S	S	S		B
Template Predicted Secondary structure																																							.
Template SS confidence
		284	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320		.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions