Job Description P26616 Confidence 93.61% Date Thu Jan 5 11:43:01 GMT 2012 Rank 109 Aligned Residues 128 % Identity 24% Template c1vjtA_ PDB info PDB header:hydrolase Chain: A: PDB Molecule:alpha-glucosidase; PDBTitle: crystal structure of alpha-glucosidase (tm0752) from thermotoga2 maritima at 2.50 a resolution Resolution 2.50 Å

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		297	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.		.	.	.	370	.	.	.	.	.
Predicted Secondary structure																																																																								.
Query SS confidence																																																																								.
Query Sequence		K	I	V	F	L	G	A	G	S	A	G	C	G	I	A	E	M	I	I	S	Q	T	Q	R	E	G	L	S	E	E	A	A	R	Q	K	V	F	M	V	D	R	F	G	L	L	T	D	K	M	P	N	L	L	P	F	Q	T	K	L	V	Q	K	R	E	N	L	S	D	W	D	.	T	D	S	D	V	L	S	L	L
Query Conservation																																																																								.
Alig confidence																.																			.	.								.	.	.	.	.	.	.																						.
Template Conservation																.																			.	.								.	.	.	.	.	.	.
Template Sequence		K	I	S	I	I	G	A	G	S	V	R	F	A	L	.	Q	L	V	G	D	I	A	Q	T	E	E	L	S	R	E	D	T	H	.	.	I	Y	X	X	D	V	H	.	.	.	.	.	.	.	E	R	R	L	N	A	S	Y	I	L	A	R	K	Y	V	E	E	L	N	S	P	V	K	I	V	K	T	S	S	L	D
Template Known Secondary structure							T	T	T	S						.									S	T	T	T		S	T	T			.	.						S		.	.	.	.	.	.	.																			T									S
Template Predicted Secondary structure																.																			.	.								.	.	.	.	.	.	.
Template SS confidence
		2	.	.	.	.	.	.	.	10	.	.	.	.	.		.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.			.	.	.	.	.	.	40								.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.
		376	.	.	.	380	.	.	.	.	.	.	.																																						.	.	390	.	.	.	.	.	.	.												.	.	400	.	.	.	.	.	.	.
Predicted Secondary structure														.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.											.	.	.	.	.	.	.	.	.	.	.
Query SS confidence														.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.											.	.	.	.	.	.	.	.	.	.	.
Query Sequence		D	V	V	R	N	V	K	P	D	I	L	I	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	G	V	S	G	Q	T	G	L	F	T	.	.	.	.	.	.	.	.	.	.	.	E	E	I	I	R	E	M	H	K	H
Query Conservation														.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.											.	.	.	.	.	.	.	.	.	.	.
Alig confidence								.	.					.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.											.	.	.	.	.	.	.	.	.	.	.
Template Conservation								.	.
Template Sequence		E	A	I	D	G	A	.	.	D	F	I	I	N	T	A	Y	P	Y	D	P	R	Y	H	D	S	G	S	Q	R	W	D	E	V	T	K	V	G	E	K	H	G	Y	Y	R	G	I	D	S	Q	E	L	N	X	V	S	T	Y	T	Y	V	L	S	S	Y	P	D	X	K	L	A	L	E	I	A	E	K	X	K	K	X
Template Known Secondary structure					T	T		.	.	S											T	T	T		S	S															T	T		T	T		T	T		B	T	T	B			T	T	S		S	T	T	T
Template Predicted Secondary structure								.	.
Template SS confidence
		72	.	.	.	.	.			.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.
		408	.	410	.	.	.	.	.	.	.	.	.	420	.	.	.	.	.	.	.	.	.	430	.	.	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		C	P	R	P	I	V	M	P	L	S	N	P	T	S	R	V	E	A	T	P	Q	D	I	I	A	W	T	E	G	N	A	L
Query Conservation
Alig confidence																.	.						.
Template Conservation																.	.						.
Template Sequence		A	P	K	A	Y	L	X	Q	T	A	N	P	V	F	.	.	E	I	T	Q	A	.	V	R	R	W	T	G	A	N	I	V
Template Known Secondary structure			T	T							S	S				.	.						.					S
Template Predicted Secondary structure																.	.						.
Template SS confidence
		150	.	.	.	.	.	.	.	.	.	160	.	.	.			.	.	.	.	.		.	170	.	.	.	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions