Job Description P26616 Confidence 96.65% Date Thu Jan 5 11:43:01 GMT 2012 Rank 35 Aligned Residues 188 % Identity 15% Template c1v9lA_ PDB info PDB header:oxidoreductase Chain: A: PDB Molecule:glutamate dehydrogenase; PDBTitle: l-glutamate dehydrogenase from pyrobaculum islandicum2 complexed with nad Resolution 2.80 Å

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		216	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.		.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.			.	.	.	.	260	.	.	.	.	.	.	.																.	.	270	.	.	.	.	.	.	.
Predicted Secondary structure																									.																		.	.													.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence																									.																		.	.													.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		P	R	I	T	D	D	E	Y	Y	E	F	V	D	E	F	I	Q	A	V	K	Q	R	W	.	P	D	V	L	L	Q	F	E	D	F	A	Q	K	N	A	M	P	.	.	L	L	N	R	Y	R	N	E	I	C	S	F	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	N	D	D	I	Q	G	T	A	A	V
Query Conservation																									.																		.	.													.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence																									.																		.	.													.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		K	K	L	S	Q	R	E	L	E	E	L	S	R	G	Y	A	R	A	I	A	P	L	I	G	D	V	V	D	I	P	A	P	D	V	G	T	N	A	Q	I	M	A	W	M	V	D	E	Y	S	K	I	K	G	Y	N	V	P	G	V	F	T	S	K	P	P	E	L	W	G	N	P	V	R	E	Y	A	T	G	F	G
Template Known Secondary structure		G	G	S																	G	G	G		B	T	T	T							T	T																		T	S			G	G	G	S		S			S	S	S	S			G	G	G	G	G
Template Predicted Secondary structure
Template SS confidence
		113	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.
		278	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.		.	.	.	350	.	.	.	.	.	.
Predicted Secondary structure																																																																							.
Query SS confidence																																																																							.
Query Sequence		T	V	G	T	L	I	A	A	S	R	A	A	G	G	Q	L	S	E	K	K	I	V	F	L	G	A	G	S	A	G	C	G	I	A	E	M	I	I	S	Q	T	Q	R	E	G	L	S	E	E	A	A	R	Q	K	V	F	M	V	D	R	F	G	L	L	T	D	K	M	P	.	N	L	L	P	F	Q	T	K	L	V
Query Conservation																																																																							.
Alig confidence																																													.	.	.	.	.	.	.	.	.	.																	.
Template Conservation																																													.	.	.	.	.	.	.	.	.	.
Template Sequence		V	A	V	A	T	R	E	M	A	K	K	L	W	G	G	I	E	G	K	T	V	A	I	Q	G	M	G	N	V	G	R	W	T	A	Y	W	L	E	K	M	G	A	K	.	.	.	.	.	.	.	.	.	.	V	I	A	V	S	D	I	N	G	V	A	Y	R	K	E	G	L	N	V	E	L	I	Q	K	N	K	G
Template Known Secondary structure															S			T	T									S												T	T	T			.	.	.	.	.	.	.	.	.	.							S	S						T	T				T						T	T	T
Template Predicted Secondary structure																																													.	.	.	.	.	.	.	.	.	.
Template SS confidence
		193	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.											.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.
		357	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.				.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.	.	.	.	.	.	.	400	.	.	.	.	.	.	.	.	.	410	.	.	.	.	.	.	.	.
Predicted Secondary structure																					.	.	.
Query SS confidence																					.	.	.
Query Sequence		Q	K	R	E	N	L	S	D	W	D	T	D	S	D	V	L	S	L	L	.	.	.	D	V	V	R	N	V	K	P	D	I	L	I	G	V	S	G	Q	T	G	L	F	T	E	E	I	I	R	E	M	H	K	H	C	P	R	P	I	V	M	P	L	S	N
Query Conservation																					.	.	.
Alig confidence																					.	.	.															.																		.	.	.	.
Template Conservation																																						.																		.	.	.	.
Template Sequence		L	T	G	P	A	L	V	E	L	F	T	T	K	D	N	A	E	F	V	K	N	P	D	A	I	F	K	L	D	V	D	I	F	V	P	A	.	A	I	E	N	V	I	R	G	D	N	A	G	L	V	K	A	R	.	.	.	.	L	V	V	E	G	A	N
Template Known Secondary structure		S												T	S						S	S	T	T	G	G	G	G				S						.	S		S	S		B		T	T	T	T	T	T				S	.	.	.	.						S	S
Template Predicted Secondary structure																																						.																		.	.	.	.
Template SS confidence
		263	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.		.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.					.	.	.	.	320	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions