Job Description P26616 Confidence 92.03% Date Thu Jan 5 11:43:01 GMT 2012 Rank 136 Aligned Residues 105 % Identity 19% Template c1lldA_ PDB info PDB header:oxidoreductase(choh (d)-nad (a)) Chain: A: PDB Molecule:l-lactate dehydrogenase; PDBTitle: molecular basis of allosteric activation of bacterial l-lactate2 dehydrogenase Resolution 2.00 Å

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		296	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		K	K	I	V	F	L	G	A	G	S	A	G	C	G	I	A	E	M	I	I	S	Q	T	Q	R	E	G	L	S	E	E	A	A	R	Q	K	V	F	M	V	D	R	F	G	L	L	T	D	K	M	P	N	L	L	P	F	Q	T	K	L	V	Q	K	R	E	N	L	S	D	W	D	T	D	S	D	V	L	S	L	L
Query Conservation
Alig confidence																											.	.	.	.	.	.	.	.	.									.	.	.	.	.	.																					.	.
Template Conservation																											.	.	.	.	.	.	.	.	.									.	.	.	.	.	.																					.	.
Template Sequence		T	K	L	A	V	I	G	A	G	A	V	G	S	T	L	A	F	A	A	A	Q	R	G	I	A	.	.	.	.	.	.	.	.	.	R	E	I	V	L	E	D	I	.	.	.	.	.	.	A	K	E	R	V	E	A	E	V	L	D	M	Q	H	G	S	S	F	Y	P	.	.	T	V	S	I	D	G	S	D	D	P
Template Known Secondary structure										S													T	T			.	.	.	.	.	.	.	.	.	S							S	.	.	.	.	.	.	S														T	G	G	G	S	T	.	.	T							S		G
Template Predicted Secondary structure																											.	.	.	.	.	.	.	.	.									.	.	.	.	.	.																					.	.
Template SS confidence
		8	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.										.	.	.	.	.	.	.	40							.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60			.	.	.	.	.	.	.	.	.	70
		376	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.	.	.	.															.	.	.	400	.	.	.	.	.	.	.	.	.	410	.	.	.	.	.	.	.	.	.
Predicted Secondary structure																							.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence																							.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		D	V	V	R	N	V	K	P	D	I	L	I	G	V	S	G	Q	T	G	L	F	.	.	.	.	.	.	.	.	.	.	.	.	.	.	T	E	E	I	I	R	E	M	H	K	H	C	P	R	P	I	V	M	P	L	S	N	P
Query Conservation																							.	.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence								.	.														.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation								.	.
Template Sequence		E	I	C	R	D	A	.	.	D	M	V	V	I	T	A	G	P	R	Q	K	P	G	Q	S	R	L	E	L	V	G	A	T	V	N	I	L	K	A	I	M	P	N	L	V	K	V	A	P	N	A	I	Y	M	L	I	T	N	P
Template Known Secondary structure		G	G	G	T	T		.	.	S												T	T																										T	T	S							S	S
Template Predicted Secondary structure								.	.
Template SS confidence
		71	.	.	.	.	.			.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions