Job Description P26616 Confidence 87.42% Date Thu Jan 5 11:43:01 GMT 2012 Rank 189 Aligned Residues 103 % Identity 19% Template c1llcA_ PDB info PDB header:oxidoreductase(choh(d)-nad(a)) Chain: A: PDB Molecule:l-lactate dehydrogenase; PDBTitle: structure determination of the allosteric l-lactate dehydrogenase from2 lactobacillus casei at 3.0 angstroms resolution Resolution 3.00 Å

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		297	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		K	I	V	F	L	G	A	G	S	A	G	C	G	I	A	E	M	I	I	S	Q	T	Q	R	E	G	L	S	E	E	A	A	R	Q	K	V	F	M	V	D	R	F	G	L	L	T	D	K	M	P	N	L	L	P	F	Q	T	K	L	V	Q	K	R	E	N	L	S	D	W	D	T	D	S	D	V	L	S	L	L	D
Query Conservation
Alig confidence																										.	.	.	.	.	.	.	.	.									.	.	.	.	.	.																					.	.	.
Template Conservation																										.	.	.	.	.	.	.	.	.									.	.	.	.	.	.																					.	.	.
Template Sequence		K	V	I	L	V	G	D	G	A	V	G	S	S	Y	A	F	A	M	V	L	Q	G	I	A	.	.	.	.	.	.	.	.	.	Q	E	I	G	I	V	D	I	.	.	.	.	.	.	F	K	D	K	T	K	G	D	A	I	D	L	S	N	A	L	P	F	T	S	.	.	.	P	K	K	I	Y	S	A	E	Y	S
Template Known Secondary structure						S		T	T														T			.	.	.	.	.	.	.	.	.	S	S						S	.	.	.	.	.	.		S											T	T	S		T	T	S		.	.	.				B				T	T	T
Template Predicted Secondary structure																										.	.	.	.	.	.	.	.	.									.	.	.	.	.	.																					.	.	.
Template SS confidence
		23	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.										.	.	.	50	.	.	.	.							.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.				.	.	.	.	.	80	.	.	.	.
		377	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.	.															.	.	.	.	.	400	.	.	.	.	.	.	.	.	.	410	.	.	.	.	.	.	.	.	.
Predicted Secondary structure																				.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence																				.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		V	V	R	N	V	K	P	D	I	L	I	G	V	S	G	Q	T	G	.	.	.	.	.	.	.	.	.	.	.	.	.	.	L	F	T	E	E	I	I	R	E	M	H	K	H	C	P	R	P	I	V	M	P	L	S	N	P
Query Conservation																				.	.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence							.	.												.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation							.	.
Template Sequence		D	A	K	D	A	.	.	D	L	V	V	I	T	A	G	A	P	K	Q	P	G	E	T	R	L	D	L	V	N	K	N	L	K	I	L	K	S	I	V	D	P	I	V	D	S	G	F	N	L	I	F	L	V	A	A	N	P
Template Known Secondary structure		T	T	S	S		.	.	S					B	T				S	S		S	S	S		S	T					T	T	S	T	T	T	T	T	T						T	T			S					B		S	S
Template Predicted Secondary structure							.	.
Template SS confidence
		87	.	.	90	.			.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions