Job Description P26616 Confidence 87.26% Date Thu Jan 5 11:43:01 GMT 2012 Rank 191 Aligned Residues 106 % Identity 19% Template c1l7eC_ PDB info PDB header:oxidoreductase Chain: C: PDB Molecule:nicotinamide nucleotide transhydrogenase, PDBTitle: crystal structure of r. rubrum transhydrogenase domain i2 with bound nadh Resolution 1.90 Å

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		275	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.											.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.
Predicted Secondary structure																			.	.	.	.	.	.	.	.	.	.
Query SS confidence																			.	.	.	.	.	.	.	.	.	.
Query Sequence		A	A	V	T	V	G	T	L	I	A	A	S	R	A	A	G	G	.	.	.	.	.	.	.	.	.	.	Q	L	S	E	K	K	I	V	F	L	G	A	G	S	A	G	C	G	I	A	E	M	I	I	S	Q	T	Q	R	E	G	L	S	E	E	A	A	R	Q	K	V	F	M	V	D	R	F	G	L	L	T	D	K
Query Conservation																			.	.	.	.	.	.	.	.	.	.
Alig confidence																			.	.	.	.	.	.	.	.	.	.																														.	.	.	.	.	.	.	.	.	.	.							.	.	.	.	.	.	.
Template Conservation																																																										.	.	.	.	.	.	.	.	.	.	.							.	.	.	.	.	.	.
Template Sequence		N	L	A	G	Y	R	A	V	I	D	G	A	Y	E	F	A	R	A	F	P	M	M	M	T	A	A	G	T	V	P	P	A	R	V	L	V	F	G	V	G	V	A	G	L	Q	A	I	A	T	A	K	R	L	G	A	V	.	.	.	.	.	.	.	.	.	.	.	V	M	A	T	D	V	.	.	.	.	.	.	.
Template Known Secondary structure																	S	S		S	S					S	S														S													T	T			.	.	.	.	.	.	.	.	.	.	.						S	.	.	.	.	.	.	.
Template Predicted Secondary structure																																																										.	.	.	.	.	.	.	.	.	.	.							.	.	.	.	.	.	.
Template SS confidence
		942	.	.	.	.	.	.	.	950	.	.	.	.	.	.	.	.	.	960	.	.	.	.	.	.	.	.	.	970	.	.	.	.	.	.	.	.	.	980	.	.	.	.	.	.	.	.	.	990	.	.	.	.	.	.	.												.	.	1000	.	.	.
		345	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.	.						.	.	.	.	.	400	.	.	.	.	.	.	.	.
Predicted Secondary structure																																																				.	.	.	.	.
Query SS confidence																																																				.	.	.	.	.
Query Sequence		M	P	N	L	L	P	F	Q	T	K	L	V	Q	K	R	E	N	L	S	D	W	D	T	D	S	D	V	L	S	L	L	D	V	V	R	N	V	K	P	D	I	L	I	G	V	S	G	Q	T	G	.	.	.	.	.	L	F	T	E	E	I	I	R	E	M	H	K	H	C
Query Conservation																																																				.	.	.	.	.
Alig confidence																						.	.	.	.	.	.	.	.										.	.												.	.	.	.	.
Template Conservation																						.	.	.	.	.	.	.	.										.	.
Template Sequence		R	A	A	T	K	E	Q	V	E	S	L	G	G	K	F	I	K	Q	A	E	.	.	.	.	.	.	.	.	A	V	L	K	E	L	V	K	T	.	.	D	I	A	I	T	T	A	L	I	P	G	K	P	A	P	V	L	I	T	E	E	M	V	T	K	M	K	P	G	S
Template Known Secondary structure		S	T	T	S					T	T	T	T									.	.	.	.	.	.	.	.							T	T		.	.	S									T	T	S						S							T	S		T	T
Template Predicted Secondary structure																						.	.	.	.	.	.	.	.										.	.
Template SS confidence
		1004	.	.	.	.	.	1010	.	.	.	.	.	.	.	.	.	1020	.	.	.									.	.	.	.	.	.	1030	.	.			.	.	.	.	.	.	.	1040	.	.	.	.	.	.	.	.	.	1050	.	.	.	.	.	.	.	.	.	1060	.	.

No model constructed - rank, confidence too low

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Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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