Job Description P26616 Confidence 95.97% Date Thu Jan 5 11:43:01 GMT 2012 Rank 49 Aligned Residues 188 % Identity 16% Template c1hrdA_ PDB info PDB header:oxidoreductase Chain: A: PDB Molecule:glutamate dehydrogenase; PDBTitle: glutamate dehydrogenase Resolution 1.96 Å

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		216	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.		.	240	.	.	.	.	.	.	.	.	.	250			.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.																.	.	270	.	.	.	.	.	.	.
Predicted Secondary structure																									.													.	.																		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence																									.													.	.																		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		P	R	I	T	D	D	E	Y	Y	E	F	V	D	E	F	I	Q	A	V	K	Q	R	W	.	P	D	V	L	L	Q	F	E	D	F	A	Q	.	.	K	N	A	M	P	L	L	N	R	Y	R	N	E	I	C	S	F	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	N	D	D	I	Q	G	T	A	A	V
Query Conservation																									.													.	.																		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence																									.													.	.																		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		N	G	K	S	D	R	E	V	M	R	F	C	Q	A	F	M	T	E	L	Y	R	H	I	G	P	D	I	D	V	P	A	G	D	L	G	V	G	A	R	E	I	G	Y	M	Y	G	Q	Y	R	K	I	V	G	G	F	Y	N	G	V	L	T	G	K	A	R	S	F	G	G	S	L	V	R	P	E	A	T	G	Y	G
Template Known Secondary structure		T	T																		G	G	G		B	T	T	T						B	T	T	B																	T	S			G	G	G	S	S	S			G	G	G	T			T	T	T	T	T
Template Predicted Secondary structure
Template SS confidence
		133	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.
		278	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		T	V	G	T	L	I	A	A	S	R	A	A	G	G	Q	L	S	E	K	K	I	V	F	L	G	A	G	S	A	G	C	G	I	A	E	M	I	I	S	Q	T	Q	R	E	G	L	S	E	E	A	A	R	Q	K	V	F	M	V	D	R	F	G	L	L	T	D	K	M	P	N	L	L	P	F	Q	T	K	L	V	Q
Query Conservation
Alig confidence																																													.	.	.	.	.	.	.	.	.	.
Template Conservation																																													.	.	.	.	.	.	.	.	.	.
Template Sequence		S	V	Y	Y	V	E	A	V	M	K	H	E	N	D	T	L	V	G	K	T	V	A	L	A	G	F	G	N	V	A	W	G	A	A	K	K	L	A	E	L	G	A	K	.	.	.	.	.	.	.	.	.	.	A	V	T	L	S	G	P	D	G	Y	I	Y	D	P	E	G	I	T	T	E	E	K	I	N	Y	M	L
Template Known Secondary structure													T	T			S	T	T									S													T	T			.	.	.	.	.	.	.	.	.	.							T	T						T	T		S		S
Template Predicted Secondary structure																																													.	.	.	.	.	.	.	.	.	.
Template SS confidence
		213	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.											.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.
		358	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.														380	.	.	.	.	.	.	.	.	.	390	.	.	.	.	.	.	.	.	.	400	.	.	.	.	.	.	.	.	.	410	.	.	.	.	.	.	.	.	.	420	.
Predicted Secondary structure																								.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence																								.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		K	R	E	N	L	S	D	W	D	T	D	S	D	V	L	S	L	L	D	V	V	R	.	.	.	.	.	.	.	.	.	.	.	.	.	N	V	K	P	D	I	L	I	G	V	S	G	Q	T	G	L	F	T	E	E	I	I	R	E	M	H	K	H	C	P	R	P	I	V	M	P	L	S	N	P	T	S
Query Conservation																								.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence									.	.	.	.	.	.	.									.	.	.	.	.	.	.	.	.	.	.	.	.													.
Template Conservation									.	.	.	.	.	.	.																																		.
Template Sequence		E	M	R	A	S	G	R	.	.	.	.	.	.	.	N	K	V	Q	D	Y	A	D	K	F	G	V	Q	F	F	P	G	E	K	P	W	G	Q	K	V	D	I	I	M	P	C	A	T	.	Q	N	D	V	D	L	E	Q	A	K	K	I	V	A	N	N	V	K	Y	Y	I	E	V	A	N	M	P	T	T
Template Known Secondary structure							S		.	.	.	.	.	.	.			T								T						T			S	T	T	S			S						S		.	T	T		B											T	T								S	S	S		B
Template Predicted Secondary structure									.	.	.	.	.	.	.																																		.
Template SS confidence
		283	.	.	.	.	.	.								290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.		.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions