Job Description P26616 Confidence 91.59% Date Thu Jan 5 11:43:01 GMT 2012 Rank 137 Aligned Residues 106 % Identity 24% Template c1gv1D_ PDB info PDB header:oxidoreductase Chain: D: PDB Molecule:malate dehydrogenase; PDBTitle: structural basis for thermophilic protein stability:2 structures of thermophilic and mesophilic malate3 dehydrogenases Resolution 2.5 Å

Show / Hide SS confidence

Show / Hide Conservation and Alignment quality

		296	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		K	K	I	V	F	L	G	A	G	S	A	G	C	G	I	A	E	M	I	I	S	Q	T	Q	R	E	G	L	S	E	E	A	A	R	Q	K	V	F	M	V	D	R	F	G	L	L	T	D	K	M	P	N	L	L	P	F	Q	T	K	L	V	Q	K	R	E	N	L	S	D	W	D	T	D	S	D	V	L	S	L	L
Query Conservation
Alig confidence																											.	.	.	.	.	.	.	.	.										.	.	.	.	.	.	.
Template Conservation																											.	.	.	.	.	.	.	.	.										.	.	.	.	.	.	.
Template Sequence		M	K	I	T	V	I	G	A	G	N	V	G	A	T	T	A	F	R	I	A	D	K	K	L	A	.	.	.	.	.	.	.	.	.	R	E	L	V	L	L	D	V	V	.	.	.	.	.	.	.	E	G	I	P	Q	G	K	G	L	D	M	Y	E	T	G	P	V	G	L	F	D	T	K	I	T	G	S	N	D	Y
Template Known Secondary structure										S													T	T			.	.	.	.	.	.	.	.	.	S							S	S	.	.	.	.	.	.	.	S	S											T	T					T									S		G
Template Predicted Secondary structure																											.	.	.	.	.	.	.	.	.										.	.	.	.	.	.	.
Template SS confidence
		1	.	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.										.	.	.	.	30	.	.	.	.								.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.
		376	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.					.	.	.	.	.	.	400	.	.	.	.	.	.	.	.	.	410	.	.	.	.	.	.	.	.	.
Predicted Secondary structure																				.	.	.	.
Query SS confidence																				.	.	.	.
Query Sequence		D	V	V	R	N	V	K	P	D	I	L	I	G	V	S	G	Q	T	.	.	.	.	G	L	F	T	E	E	I	I	R	E	M	H	K	H	C	P	R	P	I	V	M	P	L	S	N	P
Query Conservation																				.	.	.	.
Alig confidence								.	.											.	.	.	.
Template Conservation								.	.
Template Sequence		A	D	T	A	D	S	.	.	D	I	V	I	I	T	A	G	L	L	L	M	K	N	A	G	I	V	K	E	V	T	D	N	I	M	K	H	S	K	N	P	I	I	I	V	V	S	N	P
Template Known Secondary structure		G	G	S	T	T		.	.	S																										T	T		S	S								S	S
Template Predicted Secondary structure								.	.
Template SS confidence
		65	.	.	.	.	70			.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110

No model constructed - rank, confidence too low

---

Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions