Job Description P26616 Confidence 94.51% Date Thu Jan 5 11:43:01 GMT 2012 Rank 91 Aligned Residues 102 % Identity 18% Template c1ez4B_ PDB info PDB header:oxidoreductase Chain: B: PDB Molecule:lactate dehydrogenase; PDBTitle: crystal structure of non-allosteric l-lactate dehydrogenase2 from lactobacillus pentosus at 2.3 angstrom resolution Resolution 2.30 Å

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		297	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.		.	.	.	370	.	.	.	.	.
Predicted Secondary structure																																																																								.
Query SS confidence																																																																								.
Query Sequence		K	I	V	F	L	G	A	G	S	A	G	C	G	I	A	E	M	I	I	S	Q	T	Q	R	E	G	L	S	E	E	A	A	R	Q	K	V	F	M	V	D	R	F	G	L	L	T	D	K	M	P	N	L	L	P	F	Q	T	K	L	V	Q	K	R	E	N	L	S	D	W	D	.	T	D	S	D	V	L	S	L	L
Query Conservation																																																																								.
Alig confidence																										.	.	.	.	.	.	.	.	.										.	.	.	.	.	.	.	.	.	.																			.
Template Conservation																										.	.	.	.	.	.	.	.	.										.	.	.	.	.	.	.	.	.	.
Template Sequence		K	V	V	L	V	G	D	G	A	V	G	S	S	Y	A	F	A	M	A	Q	Q	G	I	A	.	.	.	.	.	.	.	.	.	E	E	F	V	I	V	D	V	V	.	.	.	.	.	.	.	.	.	.	K	D	R	T	K	G	D	A	L	D	L	E	D	A	Q	A	F	T	A	P	K	K	I	Y	S	G	E	Y
Template Known Secondary structure									S														T			.	.	.	.	.	.	.	.	.	S							S	S	.	.	.	.	.	.	.	.	.	.													G	G	G	G	G	S										G
Template Predicted Secondary structure																										.	.	.	.	.	.	.	.	.										.	.	.	.	.	.	.	.	.	.
Template SS confidence
		22	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.										.	.	.	.	50	.	.	.	.											.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.
		376	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.	.	.	.	.															.	.	400	.	.	.	.	.	.	.	.	.	410	.	.	.	.	.	.	.	.	.
Predicted Secondary structure																								.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence																								.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		D	V	V	R	N	V	K	P	D	I	L	I	G	V	S	G	Q	T	G	L	F	T	.	.	.	.	.	.	.	.	.	.	.	.	.	.	E	E	I	I	R	E	M	H	K	H	C	P	R	P	I	V	M	P	L	S	N	P
Query Conservation																								.	.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence								.	.															.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation								.	.
Template Sequence		S	D	C	K	D	A	.	.	D	L	V	V	I	T	A	G	A	P	Q	K	P	G	E	S	R	L	D	L	V	N	K	N	L	N	I	L	S	S	I	V	K	P	V	V	D	S	G	F	D	G	I	F	L	V	A	A	N	P
Template Known Secondary structure		G	G	G	T	T		.	.	S												T	T																								T	T			S						S	S	S
Template Predicted Secondary structure								.	.
Template SS confidence
		84	.	.	.	.	.			90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions