Job Description P26616 Confidence 86.05% Date Thu Jan 5 11:43:01 GMT 2012 Rank 203 Aligned Residues 136 % Identity 13% Template c1dxyA_ PDB info PDB header:oxidoreductase Chain: A: PDB Molecule:d-2-hydroxyisocaproate dehydrogenase; PDBTitle: structure of d-2-hydroxyisocaproate dehydrogenase Resolution 1.86 Å

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		257	.	.	260	.	.	.		.	.	.	.	.	.	270	.	.	.	.	.	.	.	.				.	280	.	.	.	.	.	.	.																				.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.
Predicted Secondary structure									.																.	.	.										.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence									.																.	.	.										.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		L	N	R	Y	R	N	E	.	I	C	S	F	N	D	D	I	Q	G	T	A	A	V	T	.	.	.	V	G	T	L	I	A	A	S	R	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	A	A	G	G	Q	L	S	E	K	K	I	V	F	L	G	A	G	S	A	G	C	G	I	A	E	M
Query Conservation									.																.	.	.										.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence									.																.	.	.										.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		M	T	A	M	K	Q	Y	G	I	R	L	S	N	V	P	A	Y	S	P	A	A	I	A	E	F	A	L	T	D	T	L	Y	L	L	R	N	M	G	K	V	Q	A	Q	L	Q	A	G	D	Y	E	K	A	G	T	F	I	G	K	E	L	G	Q	Q	T	V	G	V	M	G	T	G	H	I	G	Q	V	A	I	K	L
Template Known Secondary structure								T	T							T	T	S																		T	T										T	T						T							G	G	G	S								S
Template Predicted Secondary structure
Template SS confidence
		84	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.
		314	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.				.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390
Predicted Secondary structure																																																															.	.	.
Query SS confidence																																																															.	.	.
Query Sequence		I	I	S	Q	T	Q	R	E	G	L	S	E	E	A	A	R	Q	K	V	F	M	V	D	R	F	G	L	L	T	D	K	M	P	N	L	L	P	F	Q	T	K	L	V	Q	K	R	E	N	L	S	D	W	D	T	D	S	D	V	L	S	L	.	.	.	L	D	V	V	R	N	V	K	P	D	I	L	I	G	V	S
Query Conservation																																																															.	.	.
Alig confidence									.	.	.	.	.	.	.	.	.	.	.																																												.	.	.
Template Conservation									.	.	.	.	.	.	.	.	.	.	.
Template Sequence		F	K	G	F	G	A	K	.	.	.	.	.	.	.	.	.	.	.	V	I	A	Y	D	P	Y	P	M	K	G	D	H	P	D	F	D	Y	V	S	L	E	D	L	F	K	Q	S	D	V	I	D	L	H	V	P	G	I	E	Q	N	T	H	I	I	N	E	A	A	F	N	L	M	K	P	G	A	I	V	I	N	T
Template Known Secondary structure					T	T			.	.	.	.	.	.	.	.	.	.	.						S	S			S	S			T	T														S										G	G	G	T	T	S	B								S		T	T
Template Predicted Secondary structure									.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		164	.	.	.	.	.	170												.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.
		391	.	.	.	.	.	.	.	.	400	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		G	Q	T	G	L	F	T	E	E	I	I	R	E
Query Conservation
Alig confidence
Template Conservation
Template Sequence		A	R	P	N	L	I	D	T	Q	A	M	L	S
Template Known Secondary structure		S		T	T	S	B
Template Predicted Secondary structure
Template SS confidence
		233	.	.	.	.	.	.	240	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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