Job Description P0A944 Confidence 99.75% Date Thu Jan 5 11:09:20 GMT 2012 Rank 101 Aligned Residues 117 % Identity 15% Template c3fynA_ PDB info PDB header:structural genomics, unknown function Chain: A: PDB Molecule:integron gene cassette protein hfx_cass3; PDBTitle: crystal structure from the mobile metagenome of cole2 harbour salt marsh: integron cassette protein hfx_cass3 Resolution 1.45 Å

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		1	.	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.				.	.	.	.	.	.	30	.	.	.	.	.	.							.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.							.	60	.	.	.	.	.
Predicted Secondary structure																									.	.	.														.	.	.	.	.	.																							.	.	.	.	.	.
Query SS confidence																									.	.	.														.	.	.	.	.	.																							.	.	.	.	.	.
Query Sequence		M	N	T	I	S	S	L	E	T	T	D	L	P	A	A	Y	H	I	E	Q	R	A	H	.	.	.	A	F	P	W	S	E	K	T	F	A	S	N	Q	.	.	.	.	.	.	G	E	R	Y	L	N	F	Q	L	T	Q	N	G	K	M	A	A	F	A	I	T	Q	.	.	.	.	.	.	V	V	L	D	E	A	T
Query Conservation																									.	.	.														.	.	.	.	.	.																							.	.	.	.	.	.
Alig confidence																									.	.	.														.	.	.	.	.	.																							.	.	.	.	.	.
Template Conservation
Template Sequence		S	P	Q	V	R	T	A	H	I	G	D	V	P	V	L	V	R	L	X	S	E	F	Y	Q	E	A	G	F	A	L	P	H	D	A	A	I	R	A	F	K	A	L	L	G	K	P	D	L	G	R	I	W	L	I	A	E	G	T	E	S	V	G	Y	I	V	L	T	L	G	F	S	X	E	Y	G	G	L	R	G	F
Template Known Secondary structure		G	G	G						G	G	G															T	T																			G	G	G									T	T														T	T	T	T
Template Predicted Secondary structure
Template SS confidence
		2	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.
		66	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		L	F	N	I	A	V	D	P	D	Y	Q	R	Q	G	L	G	R	A	L	L	E	H	L	I	D	E	L	E	K	R	G	V	A	T	L	W	L	E	V	R	A	S	N	A	A	A	I	A	L	Y	E	S	L	G	F	N	E	A	T	I
Query Conservation
Alig confidence																																									.	.	.	.	.	.	.	.
Template Conservation																																									.	.	.	.	.	.	.	.
Template Sequence		V	D	D	F	F	V	R	P	N	A	R	G	K	G	L	G	A	A	A	L	Q	T	V	K	Q	G	C	C	D	L	G	V	R	A	L	L	V	E	T	.	.	.	.	.	.	.	.	G	V	Y	S	R	A	G	F	E	E	S	G	R
Template Known Secondary structure									G	G	G	T	T	S	S																T	T									.	.	.	.	.	.	.	.						T	T
Template Predicted Secondary structure																																									.	.	.	.	.	.	.	.
Template SS confidence
		82	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120									.	.	.	.	.	.	.	.	.	130	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions