 |
Job Description | P0A944 | Confidence | 99.83% | Date | Thu Jan 5 11:09:20 GMT 2012 |
Rank | 66 | Aligned Residues | 140 |
% Identity | 13% | Template | c3e0kA_ |
PDB info |
PDB header:transferase | Chain: A: PDB Molecule:amino-acid acetyltransferase; |
PDBTitle: crystal structure of c-termianl domain of n-acetylglutamate synthase2 from vibrio parahaemolyticus
|
Resolution | 2.52 Å |
|
 |
  |   |
3 | . | . | . | . | . | . | 10 | . | . | . | . | . | . | . | . | . | 20 | . | . | . | . | . | . | . | . | . | 30 | . | . | . | . | . | . | . | . | . | 40 | . | . | . | . | . | . | . | . | . | 50 | . | . | . | . | . | . | . | |
|
. | . | 60 | . | . | . | . | . | . | . | . | . | 70 | . | . | . | . | . | . | . | . | . | 80 |
Predicted Secondary structure |   |
 |  |  |
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|
|
|
|  |  |  |  |  |  |  |  |
|
|
|
|  |  |  |  |  |  |  |
|
|  |  |  |  |  |  |  |
| . | . |
|
|
|
|
|
|  |  |  |  |  |  |  |  |
|  |  |  |  |
|
|
|
|
Query SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . |
. |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Query Sequence |   |
T | I | S | S | L | E | T | T | D | L | P | A | A | Y | H | I | E | Q | R | A | H | A | F | P | W | S | E | K | T | F | A | S | N | Q | G | E | R | Y | L | N | F | Q | L | T | Q | N | G | K | M | A | A | F | A | I | T | . |
. |
Q | V | V | L | D | E | A | T | L | F | N | I | A | V | D | P | D | Y | Q | R | Q | G | L |
Query Conservation |   |
  |
|
|   |   |   |   |   |
|   |   |   |
|   |   |
|   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |
|   |   |   |   |   |   |
|
|
|   |   |   |   | . | . |   |   |   |   |   |   |   |   |
|   |   |   |   |
|   |
|   |   |
|
|   |
|   |
Alig confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . | . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Template Conservation |   |
  |
|
|   |
|   |   |   |
|   |   |   |
|   |   |
|   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |
|   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |
|   |   |
|   |
|   |
|   |   |
|
|   |
|
|
Template Sequence |   |
Q | V | R | Q | A | G | I | D | D | I | G | G | I | L | E | L | I | H | P | L | E | E | Q | G | I | L | R | R | S | R | E | Q | L | E | Q | E | I | G | K | F | T | I | I | E | K | D | G | L | I | I | G | C | A | A | L | Y | P | Y | S | E | E | R | K | A | E | X | A | C | V | A | I | H | P | D | Y | R | D | G | N | R |
Template Known Secondary structure |   |
 |  |  |  |
|
| G | G | G |  |  |  |  |  |  |  |  |  |  |  |  |  | T | T |
|
|
|
|
|  |  |  |  |  |  |  | G | G | G |  |  |  |  |  |  | T | T |  |  |  |  |  |  |  |  |  |  |  | G | G | G | T |  |  |  |  |  |  |  |  |  |
| G | G | G |
| S | S | S |  |
Template Predicted Secondary structure |   |
|
|
|
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|  |  |  |  |  |  |  |  |  |  |
|
|
|
|  |  |  |  |  |  |
|
|  |  |  |  |  |  |  |  |  |  |  |
|
|
|
|
|
|  |  |  |  |  |  |  |
|  |  |  |  |  |  |  |  |
Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
  |   |
300 | . | . | . | . | . | . | . | . | . | 310 | . | . | . | . | . | . | . | . | . | 320 | . | . | . | . | . | . | . | . | . | 330 | . | . | . | . | . | . | . | . | . | 340 | . | . | . | . | . | . | . | . | . | 350 | . | . | . | . | . | . | . | . | . | 360 | . | . | . | . | . | . | . | . | . | 370 | . | . | . | . | . | . | . | . | . |
  |
  |   |
81 | . | . | . | . | . | . | . | . | 90 | . | . | . | . | . | . | . | . | . | 100 | . | . | . | . | . | . | . | . | . | 110 | . | . | . | . | . | . | . | . | . | 120 | . | . | . | . | . | |
|
. | . | . | . | 130 | . | . | . | . | . | . | . | . | . | 140 | . | . | . | . | . | . |
Predicted Secondary structure |   |
|  |  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|
|  |  |  |  |  |  |
|
|
|
|  |  |  |  |  |  |  |  |  |
|
|
|  |  |  |  |  | . | . |  |  |
|  |  |  |
|
|
|
|
|  |  |  |  |  |  |  |  |  |
|
Query SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . |
. |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Query Sequence |   |
G | R | A | L | L | E | H | L | I | D | E | L | E | K | R | G | V | A | T | L | W | L | E | V | R | A | S | N | A | A | A | I | A | L | Y | E | S | L | G | F | N | E | A | T | I | . |
. |
R | R | N | Y | Y | P | T | T | D | G | R | E | D | A | I | I | M | A | L | P | I |
Query Conservation |   |
|   |   |
|   |   |   |   |   |   |   |
|   |   |   |   |   |   |   |   |   |
|   |   |   |   |   |
|   |   |
|   |   |   |
|   |
|   |
|
|   |   |   |
|   | . | . |   |   |   |   |   |   |   |   |   |   |   |   |
|   |   |   |
|   |   |   |
|
Alig confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . | . | . | . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . | . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Template Conservation |   |
|   |   |
|
|   |   |   |   |   |   |
|   |   |   |
|   |   |   |
|   |
|   | . | . | . | . |   |   |   |
|   |   |
|
|   |
|   |
|
|   |   |   |   |   |   |   |   |
|   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |
Template Sequence |   |
G | L | L | L | L | N | Y | X | K | H | R | S | K | S | E | N | I | N | Q | I | F | V | L | . |
. |
. |
. |
T | T | H | S | L | H | W | F | R | E | Q | G | F | Y | E | V | G | V | D | Y | L | P | G | A | K | Q | G | L | Y | N | F | R | K | S | K | I | L | A | L | D | L |
Template Known Secondary structure |   |
 |  |  |  |  |  |  |  |  |  |  |  |  | T | T | T |
|
|  |  |  |
|
| . | . | . | . |
| S | S |
|  |  |  |  |  |  |  | T |
|
|
|
|
| G | G | G | S |
| G | G | G |  |  |  |  | T |
|
|
|
|
|
|
|
|
|
|
|
Template Predicted Secondary structure |   |
 |  |  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|
|  |  |  |  |  | . | . | . | . |
|
|
|
|  |  |  |  |  |  |
|
|
|  |  |
|
|  |  |  |
|
|  |  |  |  |  |  |
|
|
|
|
|
|  |  |  |  |
|
|
|
Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
  |   |
381 | . | . | . | . | . | . | . | . | 390 | . | . | . | . | . | . | . | . | . | 400 | . | . | . | |
|
|
|
. | . | . | . | . | . | 410 | . | . | . | . | . | . | . | . | . | 420 | . | . | . | . | . | . | . | . | . | 430 | . | . | . | . | . | . | . | . | . | 440 | . | . | . | . |
  |
No model constructed - rank, confidence too low
Phyre is for academic use only
Please cite: Protein structure prediction on
the web: a case study using the Phyre server |
Kelley LA and Sternberg MJE. Nature Protocols
4, 363 - 371 (2009) [pdf] [Import into BibTeX] |
  |
|
|