Return to main results Retrieve Phyre Job Id

Job DescriptionP45475
Confidence83.00%DateThu Jan 5 12:02:49 GMT 2012
Rank181Aligned Residues135
% Identity16%Templated1thfd_
SCOP infoTIM beta/alpha-barrel Ribulose-phoshate binding barrel Histidine biosynthesis enzymes
Resolution1.45

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   7..10.........20.........30.........40.........50.........60.........70.....
Predicted Secondary structure 

































...........
Query SS confidence 




































































. . . . . . . . . . .
Query Sequence  PVLWYWPKETLEEFYQQAATSSADVIYLGEAVCSKRRATKVGDWLEMAKSLAGSGKQIVLSTLALVQAS. . . . . . . . . . .
Query Conservation 
    

      


  
   






      
  
   
  
     
  



 
    

   ...........
Alig confidence 

















.









........































...........
Template Conservation 

    

   
      .  

  
 
 ........                 
   
                     
Template Sequence  PFTVGGGIHDFETASELI. LRGADKVSIN. . . . . . . . TAAVENPSLITQIAQTFGSQAVVVAIDAKRVDGEFMVFTYSGK
Template Known Secondary structure 
SS

S.TT
SS........
T
GGGTTTTTT
Template Predicted Secondary structure 



.



........
















Template SS confidence 















































































   76...80.........90... ......100... ......110.........120.........130.........140......
 
   76...80.........90..... ....100..... ....110.........120.........130.......
Predicted Secondary structure  .....




...........
.










.
Query SS confidence  . . . . .



















. . . . . . . . . . .









.































.
Query Sequence  . . . . . SELGELKRYVENGEFLIEAS. . . . . . . . . . . DLGVVNMCAE. RKLPFVAGHALNCYNAVTLKILLKQGMMRWCM.
Query Conservation  ..... 
   
  
 
 
 
 


 ...........
 
       .   
 
     

 
      
   
  



.
Alig confidence  .....



















...........









.









..



















.
Template Conservation          
        
   
    
   
         
  
       

  

..
 
 


      


 



Template Sequence  KNTGILLRDWVVEVEKRGAGEILLTSIDRDGTKSGYDTEMIRFVRPLTTLPIIASGG. . AGKMEHFLEAFLAGADAALAA
Template Known Secondary structure  TT
STTTTTS
S


GGG

S
S
..

STT
SS
Template Predicted Secondary structure 






























..






Template SS confidence 















































































   147..150.........160.........170.........180.........190.........200... ......210.........220....
 
   138.140.........150..
Predicted Secondary structure  ....




Query SS confidence  . . . .














Query Sequence  . . . . PVELSRDWLVNLLNQ
Query Conservation  ....
 


  

  
   
Alig confidence  ....














Template Conservation 


  
             
Template Sequence  SVFHFREIDVRELKEYLKK
Template Known Secondary structure  TT
S
Template Predicted Secondary structure 




Template SS confidence 


















   225....230.........240...
 
Download:Text version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
Disclaimer
Terms and Conditions