 |
Job Description | P45475 | Confidence | 43.12% | Date | Thu Jan 5 12:02:49 GMT 2012 |
Rank | 457 | Aligned Residues | 100 |
% Identity | 17% | Template | d1pv8a_ |
SCOP info | TIM beta/alpha-barrel
| Aldolase
| 5-aminolaevulinate dehydratase, ALAD (porphobilinogen synthase)
|
Resolution | 2.20 |
|
 |
  |   |
45 | . | . | . | . | 50 | . | . | . | . | . | . | . | . | . | 60 | . | . | . | . | . | . | . | . | . | 70 | . | . | . | . | . | . | . | . | . | 80 | . | . | . | . | . | . | . | . | . | 90 | . | . | . | . | . | . | . | . | . | 100 | . | . | . | . | . | . | . | . | . | 110 | . | . | . | . | . | . | . | . | . | 120 | . | . | . | . |
Predicted Secondary structure |   |
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|  |  |  |  |  |
|
|
|
|
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|
|  |  |  |  |
|
|  |  |  |  |  |  |  |  |  |
|
|
|
|  |  |  |  |
|
|  |  |  |  |
|  |  |  |  |
Query SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Query Sequence |   |
T | K | V | G | D | W | L | E | M | A | K | S | L | A | G | S | G | K | Q | I | V | L | S | T | L | A | L | V | Q | A | S | S | E | L | G | E | L | K | R | Y | V | E | N | G | E | F | L | I | E | A | S | D | L | G | V | V | N | M | C | A | E | R | K | L | P | F | V | A | G | H | A | L | N | C | Y | N | A | V | T | L |
Query Conservation |   |
|   |   |   |
|   |   |
|   |   |   |   |   |
|   |   |
|
|
|
|   |
|   |   |   |   |
|
|   |   |   |   |
|   |   |   |
|   |   |
|   |
|   |
|   |
|   |
|
|
|   |
|   |
|   |   |   |   |   |   |   |   |   |   |
|   |
|   |   |   |   |   |
|
|   |
|   |   |   |   |
Alig confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . |
|
|
|
|
|
Template Conservation |   |
  |
|
|
|   |
|   |   |   |
|   |   |   |   |   |   |
|
|   |   |
|   | . |
|
|
|
|   |   |   |   |   |   |   |   |
|
|
|   |
|
|   |   |
|
|   |
|   |
|   |   |
|
|
|
|
|   |
|
| . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . |
|
|   |
|
|
Template Sequence |   |
Y | G | V | K | R | L | E | E | M | L | R | P | L | V | E | E | G | L | R | C | V | L | . |
I | F | G | V | P | E | E | S | P | A | I | E | A | I | H | L | L | R | K | T | F | P | N | L | L | V | A | C | D | V | C | L | C | A | F | R | . |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
A | E | E | S | R |
Template Known Secondary structure |   |
 |
|  |  |  |  |  |  |  |  |  |  |  |  |  |  | T |
|
|  |  |  | . |  |  |  |
|
|
|
| S |  |  |  |  |  |  |  |  |  |  |  |  | S | T | T | S |  |  |  |  |  |  |
|
|
|
|  |  | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . |  |  |  |  |  |
Template Predicted Secondary structure |   |
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|
|  |  |  | . |  |  |  |  |
|
|
|
|
|  |  |  |  |  |  |  |  |  |  |  |
|
|
|  |  |  |  |  |  |  |  |  |
|
|
|
| . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . |
|  |  |  |  |
Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
  |   |
56 | . | . | . | 60 | . | . | . | . | . | . | . | . | . | 70 | . | . | . | . | . | . | . | |
. | . | 80 | . | . | . | . | . | . | . | . | . | 90 | . | . | . | . | . | . | . | . | . | 100 | . | . | . | . | . | . | . | . | . | 110 | . | . | . | |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
. | . | . | . | . |
  |
  |   |
125 | . | . | . | . | 130 | |
|
|
|
|
|
|
. | . | . | . | . | . | . | . | . | 140 | . | . | . | . | . | . | . | . | . | 150 | . | . | . | . | . | . | . | . | . | 160 | . | . | . | . |
Predicted Secondary structure |   |
 |  |  |  |  |
| . | . | . | . | . | . | . |
|
|
|  |  |  |  |
|
|
|
|
|  |  |  |  |  |  |  |  |  |  |
|
|
|
|
|
|
|
|
|
|
|  |
Query SS confidence |   |
|
|
|
|
|
| . |
. |
. |
. |
. |
. |
. |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Query Sequence |   |
K | I | L | L | K | Q | . |
. |
. |
. |
. |
. |
. |
G | M | M | R | W | C | M | P | V | E | L | S | R | D | W | L | V | N | L | L | N | Q | C | D | E | L | G | I | R | N | Q | F | E | V |
Query Conservation |   |
  |   |
|   |   |   | . | . | . | . | . | . | . |
|   |   |
|
|
|
|
|   |
|
|
|   |   |
|
|   |   |
|   |   |   |   |   |   |   |   |   |   |   |   |   |
|   |
Alig confidence |   |
|
|
|
|
|
| . | . | . | . | . | . | . |
|
|
|
|
|
|
|
|
| . | . | . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Template Conservation |   |
  |   |
|
|   |   |
|
|   |   |
|   |
|
|
|
|
|
|
|
|
|
| . | . | . |
|
|
|
|   |
|
|
|   |   |
|
|   |   |
|   |   |
|   |
|   |
|
Template Sequence |   |
Q | R | L | A | E | V | A | L | A | Y | A | K | A | G | C | Q | V | V | A | P | S | D | . |
. |
. |
D | G | R | V | E | A | I | K | E | A | L | M | A | H | G | L | G | N | R | V | S | V |
Template Known Secondary structure |   |
 |  |  |  |  |  |  |  |  |  |  |  |  | T |
| S |  |  |  |  |
|
| . | . | . |
|
|  |  |  |  |  |  |  |  |  |  |  | T | T |
| T | T | T |
|  |  |
Template Predicted Secondary structure |   |
 |  |  |  |  |  |  |  |  |  |  |  |
|
|
|
|  |  |  |  |
|
| . | . | . |
|
|  |  |  |  |  |  |  |  |  |  |  |
|
|
|
|
|
|
|  |  |
Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
  |   |
148 | . | 150 | . | . | . | . | . | . | . | . | . | 160 | . | . | . | . | . | . | . | . | . | |
|
|
170 | . | . | . | . | . | . | . | . | . | 180 | . | . | . | . | . | . | . | . | . | 190 | . |
  |
No model constructed - rank, confidence too low
Phyre is for academic use only
Please cite: Protein structure prediction on
the web: a case study using the Phyre server |
Kelley LA and Sternberg MJE. Nature Protocols
4, 363 - 371 (2009) [pdf] [Import into BibTeX] |
  |
|
|