|   |
8 | . | 10 | . | . | . | . | . | . | |
|
|
|
|
|
. | . | . | 20 | . | . | . | . | . | . | . | . | . | 30 | . | . | . | . | . | . | . | . | . | 40 | . | . | . | . | . | . | . | . | . | 50 | . | . | . | . | . | . | . | . | . | 60 | . | . | . | . | . | . | . | . | . | 70 | . | . | . | . | . | . | . | . | . | 80 | . |
Predicted Secondary structure |   |
 |  |
|
|
|
|
|
|
| . | . | . | . | . | . |  |  |  |  |  |  |  |  |  |  |
|
|
|
|  |  |  |  |
|
|
|
|
|
|
|
|
|
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|  |  |  |  |  |
|
|
|
|
|
|
|  |  |  |  |  |  |  |
Query SS confidence |   |
|
|
|
|
|
|
|
|
| . |
. |
. |
. |
. |
. |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Query Sequence |   |
V | L | W | Y | W | P | K | E | T | . |
. |
. |
. |
. |
. |
L | E | E | F | Y | Q | Q | A | A | T | S | S | A | D | V | I | Y | L | G | E | A | V | C | S | K | R | R | A | T | K | V | G | D | W | L | E | M | A | K | S | L | A | G | S | G | K | Q | I | V | L | S | T | L | A | L | V | Q | A | S | S | E | L | G | E | L |
Query Conservation |   |
  |   |   |   |
|
|   |   |   | . | . | . | . | . | . |   |   |   |
|
|
|   |   |
|   |   |   |
|
|
|
|
|
|
|   |   |   |   |   |   |
|   |   |
|   |   |   |
|   |   |
|   |   |   |   |   |
|   |   |
|
|
|
|   |
|   |   |   |   |
|
|   |   |   |   |
|   |   |   |
|
Alig confidence |   |
|
|
|
|
|
|
|
|
| . | . | . | . | . | . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . | . | . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Template Conservation |   |
|
|
|
|   |
|   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |
|   |   |   |   |
|
|
|
| . | . | . |
|   |   |   |   |   |   |
|   |   |   |
|   |   |
|
|   |   |   |
|   |   |   |   |
|   |
|
|   |
|   |   |   |   |   |   |   |
|   |   |   |   |
Template Sequence |   |
I | P | I | A | W | T | L | A | S | G | D | T | A | R | D | I | D | S | A | L | E | M | I | E | T | R | R | H | N | R | F | K | V | K | L | . |
. |
. |
G | A | R | T | P | A | Q | D | L | E | H | I | R | S | I | V | K | A | V | G | D | R | A | S | V | R | V | D | V | N | Q | G | W | D | E | Q | T | A | S | I | W | I |
Template Known Secondary structure |   |
 |  | B |
|  |  |  |
| S | S |
|  |  |  |  |  |  |  |  |  |  |  |  |  | T | T | S |
| S |  |  |  |  |  |
| . | . | . | S | S | S |
|  |  |  |  |  |  |  |  |  |  |  |  |  |  |  | G | G | G |
|  |  |  |  |  |
| T | T |
|
|
|  |  |  |  |  |  |  |  |
Template Predicted Secondary structure |   |
 |  |  |  |  |  |  |
|
|
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|
|  |  |  |  |  |
| . | . | . |
|
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|
|
|  |  |  |  |  |
|
|
|
|
|
|  |  |  |  |  |  |  |  |
Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
  |   |
132 | . | . | . | . | . | . | . | 140 | . | . | . | . | . | . | . | . | . | 150 | . | . | . | . | . | . | . | . | . | 160 | . | . | . | . | . | . | |
|
|
. | . | . | 170 | . | . | . | . | . | . | . | . | . | 180 | . | . | . | . | . | . | . | . | . | 190 | . | . | . | . | . | . | . | . | . | 200 | . | . | . | . | . | . | . | . |
  |
  |   |
82 | . | . | . | . | . | . | . | 90 | . | . | . | |
|
|
|
. | . | . | . | . | . | 100 | . | . | . | . | . | |
. | . | . | . | 110 | . | . | . | . | . | . | . | . | . | 120 | . | . | . | . | . | . | . | . | . | 130 | . | . | . | . | . | . | . | . | . | 140 | . | |
|
|
. | . | . | . | . | . | . | . | 150 | . | . | . |
Predicted Secondary structure |   |
 |  |  |  |  |
|
|
|
|  |  |  | . | . | . | . |  |
|
|  |  |  |  |  |  |  |  |  | . |
|
|
|
|  |  |  |  |
|
|  |  |  |  |
|  |  |  |  |  |  |  |  |  |
|
|
|
|  |  |  |  |
|
|
|
| . | . | . |
|  |  |  |  |  |  |  |  |  |  |
|
Query SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
| . |
. |
. |
. |
|
|
|
|
|
|
|
|
|
|
|
| . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . |
. |
. |
|
|
|
|
|
|
|
|
|
|
|
|
Query Sequence |   |
K | R | Y | V | E | N | G | E | F | L | I | E | . |
. |
. |
. |
A | S | D | L | G | V | V | N | M | C | A | E | . |
R | K | L | P | F | V | A | G | H | A | L | N | C | Y | N | A | V | T | L | K | I | L | L | K | Q | G | M | M | R | W | C | M | P | V | E | L | . |
. |
. |
S | R | D | W | L | V | N | L | L | N | Q | C |
Query Conservation |   |
  |   |
|   |
|   |
|   |
|   |
|
| . | . | . | . |
|   |
|   |
|   |   |   |   |   |   |   | . |   |   |   |
|   |
|   |   |   |   |   |
|
|   |
|   |   |   |   |   |   |
|   |   |   |
|   |   |
|
|
|
|
|   |
|
| . | . | . |
|   |   |
|
|   |   |
|   |   |   |   |
Alig confidence |   |
|
|
|
|
|
|
|
|
|
|
|
| . | . | . | . |
|
|
|
|
|
|
|
|
|
|
|
| . |
|
|
|
|
|
|
|
|
|
|
| . | . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . | . | . |
|
|
|
|
|
|
|
|
|
|
|
|
Template Conservation |   |
  |   |
|   |   |   |   |   |   |   |
|
|
|
|   |   |   |   |
|   |   |   |   |   |   |
|   |   |   |   |   |   |
|
|
|   |
|
|   |   | . | . |   |   |   |   |   |   |   |   |   |
|   |   |   |   |   |
|   |
|   |   |
|   |   |   |   |
|
|
|
|   |   |   |   |
|
|   |   |
|
Template Sequence |   |
P | R | L | E | E | A | G | V | E | L | V | E | Q | P | V | P | R | A | N | F | G | A | L | R | R | L | T | E | Q | N | G | V | A | I | L | A | D | E | S | L | . |
. |
S | S | L | S | S | A | F | E | L | A | R | D | H | A | V | D | A | F | S | L | K | L | C | N | M | G | G | I | A | N | T | L | K | V | A | A | V | A |
Template Known Secondary structure |   |
 |  |  |  |  |  | T |
|
|  |  |  |
|
| S |
| T | T |
|  |  |  |  |  |  |  |  |  |  |
| S | S |  |  |  |  | S | T | T |
| . | . |
| S |  |  |  |  |  |  |  |  |  | T | T |
|
| S |  |  |  |  |
|  |  |  |  | T | S |  |  |  |  |  |  |  |  |  |  |  |
Template Predicted Secondary structure |   |
 |  |
|
|
|
|
|
|  |  |  |  |  |
|
|
|
|
|
|  |  |  |  |  |  |  |  |  |  |
|
|
|  |  |  |  |
|
|
|
| . | . |
|
|  |  |  |  |  |  |  |  |  |
|
|
|
|
|  |  |  |
|
|
|
|
|
|
|
|  |  |  |  |  |  |  |  |  |  |  |
Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
  |   |
209 | 210 | . | . | . | . | . | . | . | . | . | 220 | . | . | . | . | . | . | . | . | . | 230 | . | . | . | . | . | . | . | . | . | 240 | . | . | . | . | . | . | . | . | |
|
. | 250 | . | . | . | . | . | . | . | . | . | 260 | . | . | . | . | . | . | . | . | . | 270 | . | . | . | . | . | . | . | . | . | 280 | . | . | . | . | . | . |
  |
  |   |
154 | . | . | . | . | . | 160 | . | . | . | . | . | . | . | . | . | 170 | . | . | . | . | . | . | . | . | . | 180 | . | . | . | . | . | . | . | . | . | 190 | . | . | . | . | . | . | . | . | . | 200 | . | . | . | . | . | . | . | . | . | 210 | . | . | . | . | . | . | . | . | . | 220 | . | . | . | . | . | . | . |
Predicted Secondary structure |   |
|
|
|
|
|
|
|
|
|
|  |  |  |  |  |  |
|
|
|
|  |  |  |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|  |  |  |
|
|
|
|
|
|  |  |  |
|
|
|
|  |  |  |  |
|  |  |  |
Query SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Query Sequence |   |
D | E | L | G | I | R | N | Q | F | E | V | E | V | L | S | Y | G | H | L | P | L | A | Y | S | A | R | C | F | T | A | R | S | E | D | R | P | K | D | E | C | E | T | C | C | I | K | Y | P | N | G | R | N | V | L | S | Q | E | N | Q | Q | V | F | V | L | N | G | I | Q | T | M | S | G | Y | V |
Query Conservation |   |
  |   |   |   |   |   |   |   |   |
|   |
|
|
|
|
|
|   |
|   |   |   |   |
|   |   |
|   |   |
|   |   |   |   |   |   |
|   |   |
|   |   |   |
|
|   |   |   |   |   |
|   |   |   |   |   |   |   |   |   |   |   |   |   |   |
|   |   |   |
|
|   |
|
|
Alig confidence |   |
|
|
|
| . | . | . | . | . | . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . | . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Template Conservation |   |
  |   |   |
| . | . | . | . | . | . |
|   |   |   |   |   |   |   |   |   |   |   |
|   |   |
|
|   |   |
|
|   |
|
|   |   | . | . |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |
|   |   |   |   |
|   |   |
|
Template Sequence |   |
E | A | A | G | . |
. |
. |
. |
. |
. |
I | S | S | Y | G | G | T | M | L | D | S | T | V | G | T | A | A | A | L | H | V | Y | A | T | L | P | . |
. |
S | L | P | Y | G | C | E | L | I | G | P | W | V | L | G | D | R | L | T | Q | Q | D | L | E | I | K | D | F | E | V | H | L | P | L | G | S |
Template Known Secondary structure |   |
 |  |  | T | . | . | . | . | . | . |
|  |  |  |  |
|
| S | S |
|
|  |  |  |  |  |  |  |  |  |  |  | T | T | S | S | . | . |
|
| T | T |
| B |
|
|
|  |  |  |  | S | S | S |
| S | B | S | S |
|
|
|  |  | T | T |  |  |  |
|
|
| S | S |
Template Predicted Secondary structure |   |
 |  |
|
| . | . | . | . | . | . |
|  |  |  |  |
|
|
|
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |
|
| . | . |
|
|
|
|
|
|
|
|
|
|  |  |  |  |  |  |  |
|
|
|
|
|
|  |  |  |
|
|  |  |  |
|
|
|
|
|
Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
  |   |
287 | . | . | 290 | |
|
|
|
|
|
. | . | . | . | . | . | . | . | . | 300 | . | . | . | . | . | . | . | . | . | 310 | . | . | . | . | . | . | |
|
. | . | . | 320 | . | . | . | . | . | . | . | . | . | 330 | . | . | . | . | . | . | . | . | . | 340 | . | . | . | . | . | . | . | . | . | 350 | . | . |
  |