 |
Job Description | P45475 | Confidence | 61.30% | Date | Thu Jan 5 12:02:49 GMT 2012 |
Rank | 336 | Aligned Residues | 112 |
% Identity | 9% | Template | d1eixa_ |
SCOP info | TIM beta/alpha-barrel
| Ribulose-phoshate binding barrel
| Decarboxylase
|
Resolution | 2.50 |
|
 |
  |   |
60 | . | . | . | . | . | . | . | . | . | 70 | . | . | . | . | . | . | . | . | . | 80 | . | . | . | . | . | . | . | . | . | 90 | . | . | . | . | . | |
|
|
|
|
|
|
. | . | . | . | 100 | . | . | . | . | . | . | . | . | . | 110 | . | . | . | . | . | . | . | |
. | . | 120 | |
|
. | . | . | . | . | . | . | . | . |
Predicted Secondary structure |   |
|
|
|  |  |  |  |  |
|
|
|
|
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|
|  |  |  |  |
| . | . | . | . | . | . | . |
|  |  |  |  |  |  |  |  |  |
|
|
|
|  |  |  |  |
|
|  |  | . |  |  |
| . | . |  |  |  |  |  |  |  |  |  |
Query SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . |
. |
. |
. |
. |
. |
. |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . |
|
|
| . |
. |
|
|
|
|
|
|
|
|
|
Query Sequence |   |
S | G | K | Q | I | V | L | S | T | L | A | L | V | Q | A | S | S | E | L | G | E | L | K | R | Y | V | E | N | G | E | F | L | I | E | A | S | . |
. |
. |
. |
. |
. |
. |
D | L | G | V | V | N | M | C | A | E | R | K | L | P | F | V | A | G | H | A | L | N | . |
C | Y | N | . |
. |
A | V | T | L | K | I | L | L | K |
Query Conservation |   |
  |
|
|
|
|   |
|   |   |   |   |
|
|   |   |   |   |
|   |   |   |
|   |   |
|   |
|   |
|   |
|   |
|
|
|   | . | . | . | . | . | . | . |
|   |
|   |   |   |   |   |   |   |   |   |   |
|   |
|   |   |   |   |   |
| . |
|   |
| . | . |   |   |   |   |   |   |
|   |   |
Alig confidence |   |
|
|
|
|
|
|
|
|
| . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . |
|
|
|
|
|
|
|
| . | . | . | . | . | . | . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . |
|
|
| . | . |
|
|
|
|
|
|
|
|
|
Template Conservation |   |
  |   |   |   |
|
|
|
|
| . |
|   |   |   |   |   |   |   |
|   |   |   |   |   |   |   |   | . |   |
|   |   |
|
|   |
|   |   |   |   |   |   |   |
|   |   |   |
|   |   |
|   |   |   |   |   |   |
|   |   |
|   |
|   |   |
|
|
|   |
|   |   |   |   |   |   |   |   |   |   |
Template Sequence |   |
T | N | S | P | V | V | V | A | L | . |
D | Y | H | N | R | D | D | A | L | A | F | V | D | K | I | D | P | . |
R | D | C | R | L | K | V | G | K | E | M | F | T | L | F | G | P | Q | F | V | R | E | L | Q | Q | R | G | F | D | I | F | L | D | L | K | F | H | D | I | P | N | T | A | A | H | A | V | A | A | A | A | D |
Template Known Secondary structure |   |
|
|
|
|  |  |  |  |  | . |
|
| S | S |  |  |  |  |  |  |  |  | T | T | S |
| T | . | T | T |
|  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  | T | T |
|
|  |  |  |  |  |  |  |
| S |
|  |  |  |  |  |  |  |  |  |  |  |  |  |
Template Predicted Secondary structure |   |
|
|
|
|  |  |  |  |
| . |
|
|
|
|  |  |  |  |  |  |  |  |  |  |  |
|
| . |
|
|  |  |  |  |
|
|  |  |  |  |  |  |
|
|  |  |  |  |  |  |  |  |  |
|
|
|
|  |  |  |  |  |  |
|
|
|
|
|
|
|  |  |  |  |  |  |  |  |  |  |
Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
  |   |
13 | . | . | . | . | . | . | 20 | . | |
. | . | . | . | . | . | . | . | 30 | . | . | . | . | . | . | . | . | |
. | 40 | . | . | . | . | . | . | . | . | . | 50 | . | . | . | . | . | . | . | . | . | 60 | . | . | . | . | . | . | . | . | . | 70 | . | . | . | . | . | . | . | . | . | 80 | . | . | . | . | . | . | . | . | . | 90 |
  |
  |   |
130 | . | . | . | . | . | . | . | . | . | 140 | . | . | . | . | . | . | . | . | . | 150 | . | . | . | . | . | . | . | . | . | 160 | . | . | . | . | . | . | . | . | . | 170 | . | . | . |
Predicted Secondary structure |   |
|
|
|
|  |  |  |  |
|
|
|
|
|  |  |  |  |  |  |  |  |  |  |
|
|
|
|
|
|
|
|
|
|
|  |  |  |  |  |  |
|
|
|
|
Query SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Query Sequence |   |
Q | G | M | M | R | W | C | M | P | V | E | L | S | R | D | W | L | V | N | L | L | N | Q | C | D | E | L | G | I | R | N | Q | F | E | V | E | V | L | S | Y | G | H | L | P |
Query Conservation |   |
  |
|   |   |
|
|
|
|
|   |
|
|
|   |   |
|
|   |   |
|   |   |   |   |   |   |   |   |   |   |   |   |   |
|   |
|
|
|
|
|
|   |
|   |
Alig confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Template Conservation |   |
  |
|
|
|   |
|
|
|
|   |   |   |
|   |   |   |
|   |   |   |   |   |   |   |   |   |   |
|   |   |   |   |   |   |   |   |
|   |   |   |   |   |   |   |
Template Sequence |   |
L | G | V | W | M | V | N | V | H | A | S | G | G | A | R | M | M | T | A | A | R | E | A | L | V | P | F | G | K | D | A | P | L | L | I | A | V | T | V | L | T | S | M | E |
Template Known Secondary structure |   |
 | T |
| S |  |  |  |  | B | G | G | G |
|  |  |  |  |  |  |  |  |  | T | T | G | G | G | G | G | G |
|
|  |  |  |  |  |
| S |
| T | T |
|
|
Template Predicted Secondary structure |   |
|
|
|
|  |  |  |  |  |  |
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|
|
|  |  |  |  |  |  |  |
|
|
|
|
|
Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
  |   |
91 | . | . | . | . | . | . | . | . | 100 | . | . | . | . | . | . | . | . | . | 110 | . | . | . | . | . | . | . | . | . | 120 | . | . | . | . | . | . | . | . | . | 130 | . | . | . | . |
  |
No model constructed - rank, confidence too low
Phyre is for academic use only
Please cite: Protein structure prediction on
the web: a case study using the Phyre server |
Kelley LA and Sternberg MJE. Nature Protocols
4, 363 - 371 (2009) [pdf] [Import into BibTeX] |
  |
|
|