Return to main results Retrieve Phyre Job Id

Job DescriptionP45475
Confidence61.30%DateThu Jan 5 12:02:49 GMT 2012
Rank336Aligned Residues112
% Identity9%Templated1eixa_
SCOP infoTIM beta/alpha-barrel Ribulose-phoshate binding barrel Decarboxylase
Resolution2.50

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   60.........70.........80.........90..... ....100.........110....... ..120 .........
Predicted Secondary structure 














.......






.
..
Query SS confidence 



































. . . . . . .





















.


. .








Query Sequence  SGKQIVLSTLALVQASSELGELKRYVENGEFLIEAS. . . . . . . DLGVVNMCAERKLPFVAGHALN. CYN. . AVTLKILLK
Query Conservation   



 
    

    
   
  
 
 
 
 


 .......
 
          
 
     
.
 
..      
  
Alig confidence 








.
















.







.......





















.


..








Template Conservation      




.
       
        . 
  

 
       
   
  
      
  
 
  


 
          
Template Sequence  TNSPVVVAL. DYHNRDDALAFVDKIDP. RDCRLKVGKEMFTLFGPQFVRELQQRGFDIFLDLKFHDIPNTAAHAVAAAAD
Template Known Secondary structure 



.

SSTTS
T.TT
TT


S
Template Predicted Secondary structure 




.





.
















Template SS confidence 















































































   13......20. ........30........ .40.........50.........60.........70.........80.........90
 
   130.........140.........150.........160.........170...
Predicted Secondary structure 























Query SS confidence 











































Query Sequence  QGMMRWCMPVELSRDWLVNLLNQCDELGIRNQFEVEVLSYGHLP
Query Conservation   
  




 


  

  
             
 





 
 
Alig confidence 











































Template Conservation   


 



   
   
          
        
       
Template Sequence  LGVWMVNVHASGGARMMTAAREALVPFGKDAPLLIAVTVLTSME
Template Known Secondary structure  T
SBGGG
TTGGGGGG


S
TT

Template Predicted Secondary structure 
















Template SS confidence 











































   91........100.........110.........120.........130....
 
Download:Text version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
Disclaimer
Terms and Conditions