Return to main results Retrieve Phyre Job Id

Job DescriptionP45475
Confidence91.44%DateThu Jan 5 12:02:49 GMT 2012
Rank81Aligned Residues91
% Identity20%Templatec3t07D_
PDB info PDB header:transferase/transferase inhibitorChain: D: PDB Molecule:pyruvate kinase; PDBTitle: crystal structure of s. aureus pyruvate kinase in complex with a2 naturally occurring bis-indole alkaloid
Resolution3.30 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   13......20.........30.........40..... ....50.........60.........70.........80.........90
Predicted Secondary structure 


















..














Query SS confidence 
































. .












































Query Sequence  PKETLEEFYQQAATSSADVIYLGEAVCSKRRAT. . KVGDWLEMAKSLAGSGKQIVLSTLALVQASSELGELKRYVENGEF
Query Conservation 
      


  
   






      
  
..   
  
     
  



 
    

    
   
  
 
 
 
Alig confidence 











.








.........

..





















..


















.
Template Conservation 



  

 
  .   

 


.........



 
 

  

  
   
    

..



   

 

 


  
.
Template Sequence  TEKDAEDIRFGI. KENVDFIAA. . . . . . . . . SFVRRPSDVLEIREILEEQKANISVF. . PKIENQEGIDNIEEILEVS. D
Template Known Secondary structure 
.TT
S

.........TT

ST



..



STT
.S
Template Predicted Secondary structure 
.



.........










..


.
Template SS confidence 















































































   171........180.. .......190. ........200.........210....... ..220.........230...... .
 
   91... ..... 100.........110......
Predicted Secondary structure  ..

..............





Query SS confidence 



. .




. . . . . . . . . . . . . .
















Query Sequence  LIEA. . SDLGV. . . . . . . . . . . . . . VNMCAERKLPFVAGHAL
Query Conservation   


.. 
 
 ..............         
 
     
Alig confidence 



..




..............
















Template Conservation 












  
 

  

 

  
   









Template Sequence  GLMVARGDMGVEIPPEKVPMVQKDLIRQCNKLGKPVITATQM
Template Known Secondary structure 
S
GGGTTT

SSS
Template Predicted Secondary structure 














Template SS confidence 









































   238.240.........250.........260.........270.........
 
Download:Text version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
Disclaimer
Terms and Conditions