Return to main results Retrieve Phyre Job Id

Job DescriptionP45475
Confidence92.59%DateThu Jan 5 12:02:49 GMT 2012
Rank65Aligned Residues87
% Identity14%Templatec3rlhA_
PDB info PDB header:hydrolaseChain: A: PDB Molecule:sphingomyelin phosphodiesterase d lisictox-alphaia1a; PDBTitle: crystal structure of a class ii phospholipase d from loxosceles2 intermedia venom
Resolution1.72 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   13......20.........30.........40.........50.........60.........70.........80.........90..
Predicted Secondary structure 

































Query SS confidence 















































































Query Sequence  PKETLEEFYQQAATSSADVIYLGEAVCSKRRATKVGDWLEMAKSLAGSGKQIVLSTLALVQASSELGELKRYVENGEFLI
Query Conservation 
      


  
   






      
  
   
  
     
  



 
    

    
   
  
 
 
 
 
Alig confidence 

























































......















Template Conservation                                           
   
  
  
  



......    
  
   




Template Sequence  DIGDVGKAYKKAGITGHIWQSDGITNCLPRGLSRVNAAVANRDSANGFINKVYYWTVD. . . . . . KRSTTRDALDAGVDGI
Template Known Secondary structure 
T

S


TTS


STSTT


S


......ST
S
Template Predicted Secondary structure 



























......




Template SS confidence 















































































   175....180.........190.........200.........210.........220.........230.. .......240........
 
   93......100.....
Predicted Secondary structure 

Query SS confidence 












Query Sequence  EASDLGVVNMCAE
Query Conservation 

 
 
       
Alig confidence 












Template Conservation 


 
  
  

 
Template Sequence  MTNYPDVITDVLN
Template Known Secondary structure  S
T
Template Predicted Secondary structure 

Template SS confidence 












   250.........260..
 
Download:Text version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
Disclaimer
Terms and Conditions