Job Description P45475 Confidence 96.85% Date Thu Jan 5 12:02:49 GMT 2012 Rank 8 Aligned Residues 102 % Identity 9% Template c3ktsA_ PDB info PDB header:transcriptional regulator Chain: A: PDB Molecule:glycerol uptake operon antiterminator regulatory protein; PDBTitle: crystal structure of glycerol uptake operon antiterminator regulatory2 protein from listeria monocytogenes str. 4b f2365 Resolution 2.75 Å

Show / Hide SS confidence

Show / Hide Conservation and Alignment quality

		1	.	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80
Predicted Secondary structure
Query SS confidence
Query Sequence		M	K	Y	S	L	G	P	V	L	W	Y	W	P	K	E	T	L	E	E	F	Y	Q	Q	A	A	T	S	S	A	D	V	I	Y	L	G	E	A	V	C	S	K	R	R	A	T	K	V	G	D	W	L	E	M	A	K	S	L	A	G	S	G	K	Q	I	V	L	S	T	L	A	L	V	Q	A	S	S	E	L	G	E
Query Conservation
Alig confidence																										.										.	.	.	.	.	.	.	.
Template Conservation																										.										.	.	.	.	.	.	.	.
Template Sequence		L	E	L	P	F	S	N	Q	S	I	I	P	A	A	H	N	Q	K	D	M	E	K	I	L	.	E	L	D	L	T	Y	M	V	M	.	.	.	.	.	.	.	.	L	E	T	H	V	A	Q	L	K	A	L	V	K	Y	A	Q	A	G	G	K	K	V	L	L	H	A	D	L	V	N	G	L	K	N	D	D	Y	A
Template Known Secondary structure					S		T	T								S	S	S							T	.	T	S	S							.	.	.	.	.	.	.	.		S			T	T	T											T	T							G	G	G			T				S
Template Predicted Secondary structure																										.										.	.	.	.	.	.	.	.
Template SS confidence
		1	.	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.		.	.	.	.	.	30	.	.	.									.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.
		81	.	.	.	.	.		.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.
Predicted Secondary structure								.
Query SS confidence								.
Query Sequence		L	K	R	Y	V	E	.	N	G	E	F	L	I	E	A	S	D	L	G	V	V	N	M	C	A	E	R	K	L	P	F	V
Query Conservation								.
Alig confidence								.
Template Conservation
Template Sequence		I	D	F	L	C	T	E	I	C	P	D	G	I	I	S	T	R	G	N	A	I	M	K	A	K	Q	H	K	M	L	A	I
Template Known Secondary structure								T	T			S					S											T	T
Template Predicted Secondary structure
Template SS confidence
		72	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.

---

Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions