Job Description P45475 Confidence 94.49% Date Thu Jan 5 12:02:49 GMT 2012 Rank 30 Aligned Residues 133 % Identity 12% Template c3ivuB_ PDB info PDB header:transferase Chain: B: PDB Molecule:homocitrate synthase, mitochondrial; PDBTitle: homocitrate synthase lys4 bound to 2-og Resolution 2.72 Å

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		2	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.							.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.
Predicted Secondary structure																																															.	.	.	.	.	.
Query SS confidence																																															.	.	.	.	.	.
Query Sequence		K	Y	S	L	G	P	V	L	W	Y	W	P	K	E	T	L	E	E	F	Y	Q	Q	A	A	T	S	S	A	D	V	I	Y	L	G	E	A	V	C	S	K	R	R	A	T	K	.	.	.	.	.	.	V	G	D	W	L	E	M	A	K	S	L	A	G	S	G	K	Q	I	V	L	S	T	L	A	L	V	Q	A	S
Query Conservation																																															.	.	.	.	.	.
Alig confidence																									.																						.	.	.	.	.	.
Template Conservation																									.
Template Sequence		K	L	G	L	K	C	K	I	L	T	H	I	R	C	H	M	D	D	A	R	V	A	V	.	E	T	G	V	D	G	V	D	V	V	I	G	T	S	Q	Y	L	R	K	Y	S	H	D	M	T	Y	I	I	D	S	A	T	E	V	I	N	F	V	K	S	K	G	I	E	V	R	F	S	S	E	D	S	F	R	S	D
Template Known Secondary structure		T	S			S	S								S										.		T	T		S								G	G	G																										T	T								T	T	G	G	G	S
Template Predicted Secondary structure																									.
Template SS confidence
		93	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.		.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.
		76	.			.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.											.	.	100	.	.	.	.	.		.	.	.	.	110					.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.
Predicted Secondary structure				.	.																					.	.	.	.	.	.	.	.	.	.									.						.	.	.	.
Query SS confidence				.	.																					.	.	.	.	.	.	.	.	.	.									.						.	.	.	.
Query Sequence		S	E	.	.	L	G	E	L	K	R	Y	V	E	N	G	E	F	L	I	E	A	S	D	L	.	.	.	.	.	.	.	.	.	.	G	V	V	N	M	C	A	E	.	R	K	L	P	F	.	.	.	.	V	A	G	H	A	L	N	C	Y	N	A	V	T	L	K	I	L	L	K	Q	G	M	M	R	W	C	M	P
Query Conservation				.	.																					.	.	.	.	.	.	.	.	.	.									.						.	.	.	.
Alig confidence				.	.																					.	.	.	.	.	.	.	.	.	.									.						.	.	.	.															.	.	.
Template Conservation																																																																				.	.	.
Template Sequence		L	V	D	L	L	S	L	Y	K	A	V	D	K	I	G	V	N	R	V	G	I	A	D	T	V	G	C	A	T	P	R	Q	V	Y	D	L	I	R	T	L	R	G	V	V	S	C	D	I	E	C	H	F	H	N	D	T	G	M	A	I	A	N	A	Y	C	A	.	.	.	L	E	A	G	A	T	H	I	D	T	S
Template Known Secondary structure																		S							S	S	S																			S	S							B		T	T	S										.	.	.				T							B
Template Predicted Secondary structure																																																																				.	.	.
Template SS confidence
		174	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.				240	.	.	.	.	.	.	.	.	.	250

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions