|   |
18 | . | 20 | . | . | . | . | . | . | . | . | . | 30 | . | . | . | . | . | . | . | . | . | 40 | . | . | . | . | . | . | . | . | . | 50 | . | . | . | . | . | . | . | . | . | 60 | . | . | . | . | . | . | . | . | . | 70 | . | . | . | . | . | . | . | . | . | 80 | . | . | . | . | . | . | . | . | . | 90 | . | . | . | . | . | . | . |
Predicted Secondary structure |   |
 |  |  |  |  |  |  |  |  |
|
|
|
|  |  |  |  |
|
|
|
|
|
|
|
|
|
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|  |  |  |  |  |
|
|
|
|
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|
|  |  |  |  |
|
|  |
Query SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Query Sequence |   |
E | E | F | Y | Q | Q | A | A | T | S | S | A | D | V | I | Y | L | G | E | A | V | C | S | K | R | R | A | T | K | V | G | D | W | L | E | M | A | K | S | L | A | G | S | G | K | Q | I | V | L | S | T | L | A | L | V | Q | A | S | S | E | L | G | E | L | K | R | Y | V | E | N | G | E | F | L | I | E | A | S | D | L |
Query Conservation |   |
  |   |
|
|
|   |   |
|   |   |   |
|
|
|
|
|
|
|   |   |   |   |   |   |
|   |   |
|   |   |   |
|   |   |
|   |   |   |   |   |
|   |   |
|
|
|
|   |
|   |   |   |   |
|
|   |   |   |   |
|   |   |   |
|   |   |
|   |
|   |
|   |
|   |
|
|
|   |
|   |
Alig confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . | . | . | . | . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . | . | . | . | . | . | . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Template Conservation |   |
  |   |   |   |   |   |   |   |   |
|
|
|
|   |
|   |
|   |   |   |   |   |   | . | . | . | . | . |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |
|
|   |
|   |   |   |   |   |
| . | . | . | . | . | . | . |   |   |   |
|   |   |
|   |   |   |
|   |   |   |
|   |   |   |   |   |
Template Sequence |   |
L | D | D | V | D | A | L | A | Q | A | G | A | A | I | I | A | V | D | G | T | A | R | Q | . |
. |
. |
. |
. |
R | P | V | A | V | E | A | L | L | A | R | I | H | H | H | H | L | L | T | X | A | D | C | S | S | . |
. |
. |
. |
. |
. |
. |
V | D | D | G | L | A | C | Q | R | L | G | A | D | I | I | G | T | T | X | S |
Template Known Secondary structure |   |
 |  |  |  |  |  |  |  |  | T | T |
| S |  |  |  |  |  |
|
|
| S | S | . | . | . | . | . |
| S | S |
|  |  |  |  |  |  |  |  |  |  | T | T |
|  |  |  |  |  |
|
| S | . | . | . | . | . | . | . |  |  |  |  |  |  |  |  |  |  | T |
| S |  |  |  |
| T | T | T |
Template Predicted Secondary structure |   |
 |  |  |  |  |  |  |  |  |
|
|
|
|  |  |  |  |
|
|
|
|
|
| . | . | . | . | . |
|  |  |  |  |  |  |  |  |  |  |  |  |  |
|
|  |  |  |
|
|
|
|
|
| . | . | . | . | . | . | . |  |  |  |  |  |  |  |  |  |
|
|
|
|  |  |  |  |  |  |  |
Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
  |   |
88 | . | 90 | . | . | . | . | . | . | . | . | . | 100 | . | . | . | . | . | . | . | . | . | 110 | |
|
|
|
|
. | . | . | . | . | . | . | . | . | 120 | . | . | . | . | . | . | . | . | . | 130 | . | . | . | . | . | |
|
|
|
|
|
|
. | . | . | . | 140 | . | . | . | . | . | . | . | . | . | 150 | . | . | . | . | . |
  |
  |   |
98 | |
|
|
|
|
|
|
|
|
|
|
|
|
. | 100 | . | . | . | . | . | . | . | . | . | 110 | . | . | . | . | . | . | . | . | . | 120 | . | . | . | . | . | . | . | . | . | 130 | . | . | . | . | . | . | . |
Predicted Secondary structure |   |
 | . | . | . | . | . | . | . | . | . | . | . | . | . |  |  |  |  |  |  |  |
|
|
|
|  |  |  |  |
|
|  |  |  |  |
|  |  |  |  |  |  |  |  |  |
|
|
|
|  |  |  |  |
Query SS confidence |   |
| . |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Query Sequence |   |
G | . |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
V | V | N | M | C | A | E | R | K | L | P | F | V | A | G | H | A | L | N | C | Y | N | A | V | T | L | K | I | L | L | K | Q | G | M | M | R | W | C | M |
Query Conservation |   |
| . | . | . | . | . | . | . | . | . | . | . | . | . |   |   |   |   |   |   |   |   |   |   |
|   |
|   |   |   |   |   |
|
|   |
|   |   |   |   |   |   |
|   |   |   |
|   |   |
|
|
|
|
Alig confidence |   |
| . | . | . | . | . | . | . | . | . | . | . | . | . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . | . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Template Conservation |   |
  |   |   |   |   |   |   |   |   |   |   |   |   |   |
|   |   |   |   |   |   |   |   |
|
|
|
|
|   |
| . | . |
|
|   |
|   |
|
|
|   |   |   |   |   |   |
|
|
|
|
|
|
|
Template Sequence |   |
G | Y | T | T | P | D | T | P | E | E | P | D | L | P | L | V | K | A | L | H | D | A | G | C | R | V | I | A | E | G | . |
. |
R | Y | N | S | P | A | L | A | A | E | A | I | R | Y | G | A | W | A | V | T | V |
Template Known Secondary structure |   |
T |
| S | S | S |
|
|
| S | S |
|
|  |  |  |  |  |  |  |  |  | T | T |
|
|  |  |  |  | S | . | . |
|
|
| S |  |  |  |  |  |  |  |  |  | T | T |
| S |  |  |  |  |
Template Predicted Secondary structure |   |
|
|
|
|
|
|
|
|  |  |  |  |  |  |  |  |  |  |  |
|
|
|
|
|  |  |  |  |  |
| . | . |
|
|
|
|  |  |  |  |  |  |  |  |  |
|
|
|
|  |  |  |  |
Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
  |   |
156 | . | . | . | 160 | . | . | . | . | . | . | . | . | . | 170 | . | . | . | . | . | . | . | . | . | 180 | . | . | . | . | . | |
|
. | . | . | . | 190 | . | . | . | . | . | . | . | . | . | 200 | . | . | . | . | . | . |
  |