Return to main results Retrieve Phyre Job Id

Job DescriptionP45475
Confidence63.69%DateThu Jan 5 12:02:49 GMT 2012
Rank317Aligned Residues55
% Identity9%Templatec3i9sA_
PDB info PDB header:transferaseChain: A: PDB Molecule:integron cassette protein; PDBTitle: structure from the mobile metagenome of v.cholerae. integron2 cassette protein vch_cass6
Resolution2.20 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   98.100.........110.........120.........130..... ....140.........150...
Predicted Secondary structure 










..





Query SS confidence 





































. .

















Query Sequence  GVVNMCAERKLPFVAGHALNCYNAVTLKILLKQGMMRW. . CMPVELSRDWLVNLLNQC
Query Conservation 
          
 
     

 
      
   
  

..


 


  

  
    
Alig confidence 











.
























..

















Template Conservation       
   
  . 
 
 
   
  
  

 
 

    
       
  
       
Template Sequence  HLATIAITHNCQ. RLDWTAESTNPTAGKFYKSIGASLIREKEYYRFEGNGLNKLAKSL
Template Known Secondary structure  TT.



TT
TT



TT






T
Template Predicted Secondary structure 



.













Template SS confidence 

























































   106...110....... ..120.........130.........140.........150.........160..
 
Download:Text version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
Disclaimer
Terms and Conditions