Return to main results Retrieve Phyre Job Id

Job DescriptionP45475
Confidence96.48%DateThu Jan 5 12:02:49 GMT 2012
Rank11Aligned Residues113
% Identity19%Templatec3g8rA_
PDB info PDB header:biosynthetic proteinChain: A: PDB Molecule:probable spore coat polysaccharide biosynthesis protein e; PDBTitle: crystal structure of putative spore coat polysaccharide biosynthesis2 protein e from chromobacterium violaceum atcc 12472
Resolution2.49 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   44.....50.........60.........70.........80.........90.... .....100.........110........
Predicted Secondary structure 
















.....







Query SS confidence 


















































. . . . .























Query Sequence  ATKVGDWLEMAKSLAGSGKQIVLSTLALVQASSELGELKRYVENGEFLIEA. . . . . SDLGVVNMCAERKLPFVAGHALNC
Query Conservation   
   
  
     
  



 
    

    
   
  
 
 
 
 


..... 
 
          
 
     

Alig confidence 























.......



















.....























Template Conservation 

  
    
       

 
 

.......


  


 
  
     



 

 
 


  

  











Template Sequence  RLQPEQXQKLVAEXKANGFKAICT. . . . . . . PFDEESVDLIEAHGIEIIKIASCSFTDWPLLERIARSDKPVVASTAGAR
Template Known Secondary structure 


TT
.......
STT


SSSTT
TS
S

TT

Template Predicted Secondary structure 





.......


















Template SS confidence 















































































   74.....80.........90....... ..100.........110.........120.........130.........140......
 
   119120. ........130......... 140.........150.........160.........170.........
Predicted Secondary structure 
..





.........




















Query SS confidence 


. .

















. . . . . . . . .







































Query Sequence  YNA. . VTLKILLKQGMMRWCMPV. . . . . . . . . ELSRDWLVNLLNQCDELGIRNQFEVEVLSYGHLPLAYSAR
Query Conservation   
 ..     
   
  




 .........


  

  
             
 





 
    
  
Alig confidence 


..

















.........











................











Template Conservation 
 

  

      
  
 



 
 

   
  

  
  

 ................ 
    

 


Template Sequence  REDIDKVVSFXLHRGKDLTIXHCVAEYPTPDDHLHLARIKTLRQ. . . . . . . . . . . . . . . . QYAGVRIGYSTH
Template Known Secondary structure  TTT





SS

GGG

TT................
TTS
Template Predicted Secondary structure 













................








Template SS confidence 







































































   147..150.........160.........170.........180.........190 .........200..
 
Download:Text version FASTA pairwise alignment 3D Model in PDB format

View in Jmol

Send structure to FirstGlance for more viewing options


Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
Disclaimer
Terms and Conditions