Job Description P45475 Confidence 91.57% Date Thu Jan 5 12:02:49 GMT 2012 Rank 79 Aligned Residues 142 % Identity 12% Template c3ez4B_ PDB info PDB header:transferase Chain: B: PDB Molecule:3-methyl-2-oxobutanoate hydroxymethyltransferase; PDBTitle: crystal structure of 3-methyl-2-oxobutanoate2 hydroxymethyltransferase from burkholderia pseudomallei Resolution 2.10 Å

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		24	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.							.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.		.	.	.	.	.	70	.	.	.	.				.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.
Predicted Secondary structure																						.	.	.	.	.	.																						.											.	.	.
Query SS confidence																						.	.	.	.	.	.																						.											.	.	.
Query Sequence		A	A	T	S	S	A	D	V	I	Y	L	G	E	A	V	C	S	K	R	R	.	.	.	.	.	.	A	T	K	V	G	D	W	L	E	M	A	K	S	L	A	G	S	G	K	Q	I	.	V	L	S	T	L	A	L	V	Q	A	.	.	.	S	S	E	L	G	E	L	K	R	Y	V	E	N	G	E	F	L	I	E
Query Conservation																						.	.	.	.	.	.																						.											.	.	.
Alig confidence																						.	.	.	.	.	.																						.											.	.	.
Template Conservation
Template Sequence		L	D	R	A	N	V	D	V	Q	L	I	G	D	S	L	G	N	V	L	Q	G	Q	A	T	T	L	P	V	T	L	D	D	I	A	Y	H	T	A	C	V	A	R	A	Q	P	R	G	L	V	V	A	D	L	P	F	G	T	Y	G	T	P	A	D	A	F	A	S	A	V	K	L	M	R	A	G	A	Q	M	V	K
Template Known Secondary structure					T	T		S						T	T					T	T			S	S	S	T	T																T			S	S								T	T	S		S	S														T	T		S
Template Predicted Secondary structure
Template SS confidence
		31	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110
		94	.	.					.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.		.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.
Predicted Secondary structure					.	.	.	.																											.
Query SS confidence					.	.	.	.																											.
Query Sequence		A	S	D	.	.	.	.	L	G	V	V	N	M	C	A	E	R	K	L	P	F	V	A	G	H	A	L	N	C	Y	N	A	V	.	T	L	K	I	L	L	K	Q	G	M	M	R	W	C	M	P	V	E	L	S	R	D	W	L	V	N	L	L	N	Q	C	D	E	L	G	I	R	N	Q	F	E	V	E	V	L	S
Query Conservation					.	.	.	.																											.
Alig confidence					.	.	.	.																											.																		.														.	.	.	.	.	.	.
Template Conservation																																																					.														.	.	.	.	.	.	.
Template Sequence		L	E	G	G	E	W	L	A	E	T	V	R	F	L	V	E	R	A	V	P	V	C	A	H	V	G	L	G	A	A	Q	L	L	R	D	A	R	A	V	E	E	A	G	A	Q	L	I	V	L	E	A	.	V	P	T	L	V	A	A	E	V	T	R	E	L	.	.	.	.	.	.	.	S	I	P	T	I	G	I	G
Template Known Secondary structure						G	G	G										T	T																									T		S						S	.														.	.	.	.	.	.	.	S	S						S
Template Predicted Secondary structure																																																					.														.	.	.	.	.	.	.
Template SS confidence
		111	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.		.	.	.	.	.	.	.	.	170	.	.	.	.								.	.	.	.	.	180	.	.
		169	170	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		Y	G	H	L	P
Query Conservation
Alig confidence
Template Conservation
Template Sequence		A	G	A	E	C
Template Known Secondary structure		S		S		S
Template Predicted Secondary structure
Template SS confidence
		202	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions