Job Description P45475 Confidence 44.45% Date Thu Jan 5 12:02:49 GMT 2012 Rank 450 Aligned Residues 81 % Identity 6% Template c3brsA_ PDB info PDB header:transport protein Chain: A: PDB Molecule:periplasmic binding protein/laci transcriptional regulator; PDBTitle: crystal structure of sugar transporter from clostridium2 phytofermentans Resolution 2.00 Å

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		31	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.		.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.							.	.	.	.	.	100	.	.	.
Predicted Secondary structure																																								.																											.	.	.	.	.	.
Query SS confidence																																								.																											.	.	.	.	.	.
Query Sequence		V	I	Y	L	G	E	A	V	C	S	K	R	R	A	T	K	V	G	D	W	L	E	M	A	K	S	L	A	G	S	G	K	Q	I	V	L	S	T	.	L	A	L	V	Q	A	S	S	E	L	G	E	L	K	R	Y	V	E	N	G	E	F	L	I	E	A	.	.	.	.	.	.	S	D	L	G	V	V	N	M	C
Query Conservation																																								.																											.	.	.	.	.	.
Alig confidence										.																														.																											.	.	.	.	.	.
Template Conservation										.
Template Sequence		M	I	C	I	P	K	V	L	.	D	D	S	S	D	F	W	S	V	L	V	E	G	A	Q	M	A	A	K	E	Y	E	I	K	L	E	F	M	A	P	E	K	E	E	D	Y	L	V	Q	N	E	L	I	E	E	A	I	K	R	K	P	D	V	I	L	L	A	A	A	D	Y	E	K	T	Y	D	A	A	K	E	I
Template Known Secondary structure							S			.		S	S	S																		T									S	S	T	T															T			S							S		T	T	T	T					T	T	T
Template Predicted Secondary structure										.
Template SS confidence
		8	.	10	.	.	.	.	.		.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.
		104	.	.	.	.	.	110	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		A	E	R	K	L	P	F	V	A
Query Conservation
Alig confidence
Template Conservation
Template Sequence		K	D	A	G	I	K	L	I	V
Template Known Secondary structure		G	G	G	T
Template Predicted Secondary structure
Template SS confidence
		87	.	.	90	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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