Job Description P45475 Confidence 79.30% Date Thu Jan 5 12:02:49 GMT 2012 Rank 219 Aligned Residues 133 % Identity 12% Template c2zyfA_ PDB info PDB header:transferase Chain: A: PDB Molecule:homocitrate synthase; PDBTitle: crystal structure of homocitrate synthase from thermus thermophilus2 complexed with magnesuim ion and alpha-ketoglutarate Resolution 2.15 Å

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		2	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.		.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.			.	.	.	.	.	.	.	.	70	.	.		.	.	.	.	.
Predicted Secondary structure																																												.																			.	.												.
Query SS confidence																																												.																			.	.												.
Query Sequence		K	Y	S	L	G	P	V	L	W	Y	W	P	K	E	T	L	E	E	F	Y	Q	Q	A	A	T	S	S	A	D	V	I	Y	L	G	E	A	V	C	S	K	R	R	.	A	T	K	V	G	D	W	L	E	M	A	K	S	L	A	G	S	G	.	.	K	Q	I	V	L	S	T	L	A	L	V	.	Q	A	S	S	E
Query Conservation																																												.																			.	.												.
Alig confidence																									.																			.																			.	.												.
Template Conservation																									.
Template Sequence		S	L	G	L	K	A	K	V	V	T	H	I	Q	C	R	L	D	A	A	K	V	A	V	.	E	T	G	V	Q	G	I	D	L	L	F	G	T	S	K	G	R	D	I	P	R	I	I	E	E	A	K	E	V	I	A	Y	I	R	E	A	A	P	H	V	E	V	R	F	S	A	E	D	T	F	R	S	E	E	Q	D
Template Known Secondary structure			S			S	S								S										.		T	T		S								S																									T	T	S							S	S	T	T	T	S
Template Predicted Secondary structure																									.
Template SS confidence
		62	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.		.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140
		78	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.											.	.	.	100	.	.	.	.	.				.	.	.	.	110					.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.
Predicted Secondary structure																					.	.	.	.	.	.	.	.	.	.										.	.	.						.	.	.	.
Query SS confidence																					.	.	.	.	.	.	.	.	.	.										.	.	.						.	.	.	.
Query Sequence		L	G	E	L	K	R	Y	V	E	N	G	E	F	L	I	E	A	S	D	.	.	.	.	.	.	.	.	.	.	L	G	V	V	N	M	C	A	E	.	.	.	R	K	L	P	F	.	.	.	.	V	A	G	H	A	L	N	C	Y	N	A	V	T	L	K	I	L	L	K	Q	G	M	M	R	W	C	M	P
Query Conservation																					.	.	.	.	.	.	.	.	.	.										.	.	.						.	.	.	.
Alig confidence																					.	.	.	.	.	.	.	.	.	.										.	.	.						.	.	.	.																.	.	.
Template Conservation																																																																			.	.	.
Template Sequence		L	L	A	V	Y	E	A	V	A	P	Y	V	D	R	V	G	L	A	D	T	V	G	V	A	T	P	R	Q	V	Y	A	L	V	R	E	V	R	R	V	V	G	P	R	V	D	I	E	F	H	G	H	N	D	T	G	C	A	I	A	N	A	Y	E	A	I	.	.	.	E	A	G	A	T	H	V	D	T	T
Template Known Secondary structure										G	G	G		S							T	T	S																			T	T	T	S							B		T	T	S											.	.	.		T	T							B
Template Predicted Secondary structure																																																																			.	.	.
Template SS confidence
		147	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.				.	.	.	.	.	.	.	.	220	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions