Return to main results Retrieve Phyre Job Id

Job DescriptionP45475
Confidence72.53%DateThu Jan 5 12:02:49 GMT 2012
Rank267Aligned Residues126
% Identity15%Templatec2yx0A_
PDB info PDB header:metal binding proteinChain: A: PDB Molecule:radical sam enzyme; PDBTitle: crystal structure of p. horikoshii tyw1
Resolution2.21 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   8.10.........20.........30.... .....40.........50.........60.........70.........80....
Predicted Secondary structure 










...





















Query SS confidence 


























. . .

















































Query Sequence  VLWYWPKETLEEFYQQAATSSADVIYL. . . GEAVCSKRRATKVGDWLEMAKSLAGSGKQIVLSTLALVQASSELGELKRY
Query Conservation      

      


  
   





...
      
  
   
  
     
  



 
    

    
   
  
Alig confidence 
















...






...

.......




























...








Template Conservation 

               ...    
 

  

.......


   
 


      

 
 
 


  ...      
  
Template Sequence  LIGYKPKVDKKKFEEAW. . . NPTHAAISLSGE. . . . . . . PMLYPYMGDLVEEFHKRGFTTFIVTNGTI. . . PERLEEMIK
Template Known Secondary structure  TT



S
T...S


SSS
.......GGGSTTTT

S

...
Template Predicted Secondary structure 












...






.......










...
Template SS confidence 















































































   122.......130........ .140.........150 .........160.........170......... 180........
 
   85....90 .........100.........110.........120.........130.. .......140.........150.
Predicted Secondary structure 



....











...





Query SS confidence 





. . . .









































. . .


















Query Sequence  VENGEF. . . . LIEASDLGVVNMCAERKLPFVAGHALNCYNAVTLKILLKQGM. . . MRWCMPVELSRDWLVNLLN
Query Conservation   
 
 
.... 


 
 
          
 
     

 
      
   
 ... 




 


  

  
  
Alig confidence 





....



























.....








...


















Template Conservation         
 




   
    
 
       
 

  .....
  
        

 




 
 

 
  
 
Template Sequence  EDKLPTQLYVSITAPDIETYNSVNIPMIPDGWERILRF. . . . . LELMRDLPTRTVVRLTLVKGENMHSPEKYAK
Template Known Secondary structure  TT


S

SS
BSSS
.....TT
SS
TTTT


Template Predicted Secondary structure 
















.....







Template SS confidence 









































































   191........200.........210.........220........ .230.........240.........250.........
 
Download:Text version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
Disclaimer
Terms and Conditions