Return to main results Retrieve Phyre Job Id

Job DescriptionP45475
Confidence87.50%DateThu Jan 5 12:02:49 GMT 2012
Rank130Aligned Residues97
% Identity6%Templatec2vc6A_
PDB info PDB header:lyaseChain: A: PDB Molecule:dihydrodipicolinate synthase; PDBTitle: structure of mosa from s. meliloti with pyruvate bound
Resolution1.95 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   15....20.........30.........40.........50......... 60.........70.........80.........90..
Predicted Secondary structure 

















..













Query SS confidence 












































. .
































Query Sequence  ETLEEFYQQAATSSADVIYLGEAVCSKRRATKVGDWLEMAKSLAG. . SGKQIVLSTLALVQASSELGELKRYVENGEFLI
Query Conservation       


  
   






      
  
   
  
     
 .. 



 
    

    
   
  
 
 
 
 
Alig confidence 






















.




















..
































Template Conservation        
  
   

 

   

.


   

 


  
             

 

   
    
  
  
   


 
Template Sequence  VALHDLVEWQIEEGSFGLVPCGT. TGESPTLSKSEHEQVVEITIKTANGRVPVIAGAGSNSTAEAIAFVRHAQNAGADGV
Template Known Secondary structure  TT
STTSG.GGTGGGS
TTSS
B


SSTT
S
Template Predicted Secondary structure 






.


















Template SS confidence 















































































   21........30.........40... ......50.........60.........70.........80.........90.........
 
   93. .....100..... ....110..
Predicted Secondary structure  ........

....



Query SS confidence 

. . . . . . . .










. . . .






Query Sequence  EA. . . . . . . . SDLGVVNMCAE. . . . RKLPFVA
Query Conservation 

........ 
 
       ....   
 
 
Alig confidence 

........










....






Template Conservation   
  
     
   
      

     

 
Template Sequence  LIVSPYYNKPTQEGIYQHFKAIDAASTIPIIV
Template Known Secondary structure 


SS



SS
Template Predicted Secondary structure 












Template SS confidence 































   100.........110.........120.........130.
 
Download:Text version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
Disclaimer
Terms and Conditions