Job Description P45475 Confidence 72.60% Date Thu Jan 5 12:02:49 GMT 2012 Rank 266 Aligned Residues 97 % Identity 10% Template c2v9dB_ PDB info PDB header:lyase Chain: B: PDB Molecule:yage; PDBTitle: crystal structure of yage, a prophage protein belonging to2 the dihydrodipicolinic acid synthase family from e. coli3 k12 Resolution 2.15 Å

Show / Hide SS confidence

Show / Hide Conservation and Alignment quality

		15	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60			.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.
Predicted Secondary structure																																																.	.
Query SS confidence																																																.	.
Query Sequence		E	T	L	E	E	F	Y	Q	Q	A	A	T	S	S	A	D	V	I	Y	L	G	E	A	V	C	S	K	R	R	A	T	K	V	G	D	W	L	E	M	A	K	S	L	A	G	S	.	.	G	K	Q	I	V	L	S	T	L	A	L	V	Q	A	S	S	E	L	G	E	L	K	R	Y	V	E	N	G	E	F	L	I
Query Conservation																																																.	.
Alig confidence																								.																								.	.
Template Conservation																								.
Template Sequence		P	G	T	A	A	L	I	D	D	L	I	K	A	G	V	D	G	L	F	F	L	G	.	S	G	G	E	F	S	Q	L	G	A	E	E	R	K	A	I	A	R	F	A	I	D	H	V	D	R	R	V	P	V	L	I	G	T	G	G	T	N	A	R	E	T	I	E	L	S	Q	H	A	Q	Q	A	G	A	D	G	I
Template Known Secondary structure														T	T		S					S	S	.	T	T	T	T	G	G	G	S																	T	T	S	S								S	S																T		S
Template Predicted Secondary structure																								.
Template SS confidence
		34	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.		.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.
		93	.									.	.	.	.	.	100	.	.	.	.	.					.	.	.	.	110	.	.
Predicted Secondary structure				.	.	.	.	.	.	.	.												.	.	.	.
Query SS confidence				.	.	.	.	.	.	.	.												.	.	.	.
Query Sequence		E	A	.	.	.	.	.	.	.	.	S	D	L	G	V	V	N	M	C	A	E	.	.	.	.	R	K	L	P	F	V	A
Query Conservation				.	.	.	.	.	.	.	.												.	.	.	.
Alig confidence				.	.	.	.	.	.	.	.												.	.	.	.
Template Conservation
Template Sequence		V	V	I	N	P	Y	Y	W	K	V	S	E	A	N	L	I	R	Y	F	E	Q	V	A	D	S	V	T	L	P	V	X	L
Template Known Secondary structure							S	S	S																			S	S
Template Predicted Secondary structure
Template SS confidence
		113	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.

No model constructed - rank, confidence too low

---

Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions