Job Description P45475 Confidence 81.98% Date Thu Jan 5 12:02:49 GMT 2012 Rank 196 Aligned Residues 56 % Identity 13% Template c1ud8A_ PDB info PDB header:hydrolase Chain: A: PDB Molecule:amylase; PDBTitle: crystal structure of amyk38 with lithium ion Resolution 2.88 Å

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		10	.	.								.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.										.	.																		.	.	.	.	50	.	.	.	.	.	.
Predicted Secondary structure					.	.	.	.	.	.	.																																.	.	.	.	.	.	.	.	.			.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence					.	.	.	.	.	.	.																																.	.	.	.	.	.	.	.	.			.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		W	Y	W	.	.	.	.	.	.	.	P	K	E	T	L	E	E	F	Y	Q	Q	A	A	T	S	S	A	D	V	I	Y	L	G	E	A	V	C	S	K	R	R	.	.	.	.	.	.	.	.	.	A	T	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	K	V	G	D	W	L	E	M	A	K	S
Query Conservation					.	.	.	.	.	.	.																																.	.	.	.	.	.	.	.	.			.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence					.	.	.	.	.	.	.																							.									.	.	.	.	.	.	.	.	.			.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation																																		.
Template Sequence		Y	E	W	H	L	E	N	D	G	Q	H	W	N	R	L	H	D	D	A	A	A	L	S	D	A	G	I	T	A	I	W	I	.	P	P	A	Y	K	G	N	S	Q	A	D	V	G	Y	G	A	Y	D	L	Y	D	L	G	E	F	N	Q	K	G	T	V	R	T	K	Y	G	T	K	A	Q	L	E	R	A	I	G	S
Template Known Secondary structure				T	T			S	S	S																	T							.				S			S	S	T	T			S	S	S				T	T		S	S		S		B	T	T	B	S	S		S	S
Template Predicted Secondary structure																																		.
Template SS confidence
		11	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.		.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.
		57	.	.	60	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		L	A	G	S	G	K	Q	I	V	L
Query Conservation
Alig confidence
Template Conservation
Template Sequence		L	K	S	N	D	I	N	V	Y	G
Template Known Secondary structure					T	T
Template Predicted Secondary structure
Template SS confidence
		90	.	.	.	.	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions