Job Description P45475 Confidence 61.99% Date Thu Jan 5 12:02:49 GMT 2012 Rank 330 Aligned Residues 128 % Identity 13% Template c1tv5A_ PDB info PDB header:oxidoreductase Chain: A: PDB Molecule:dihydroorotate dehydrogenase homolog, mitochondrial; PDBTitle: plasmodium falciparum dihydroorotate dehydrogenase with a bound2 inhibitor Resolution 2.40 Å

Show / Hide SS confidence

Show / Hide Conservation and Alignment quality

		12	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.			.	30	.	.	.	.	.	.	.				.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.															.	.	.	.	.	.	.	70	.	.
Predicted Secondary structure																			.	.										.	.	.																										.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence																			.	.										.	.	.																										.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		W	P	K	E	T	L	E	E	F	Y	Q	Q	A	A	T	S	S	.	.	A	D	V	I	Y	L	G	E	A	.	.	.	V	C	S	K	R	R	A	T	K	V	G	D	W	L	E	M	A	K	S	L	A	G	S	G	K	.	.	.	.	.	.	.	.	.	.	.	.	.	.	Q	I	V	L	S	T	L	A	L	V
Query Conservation																			.	.										.	.	.																										.	.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence																			.	.										.	.	.																										.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		D	T	V	N	I	V	D	D	L	K	Y	C	I	N	K	I	G	R	Y	A	D	Y	I	A	I	N	V	S	S	P	N	T	P	G	L	R	D	N	Q	E	A	G	K	L	K	N	I	I	L	S	V	K	E	E	I	D	N	L	E	F	L	W	F	N	T	T	K	K	K	P	L	V	F	V	K	L	A	P	D	L
Template Known Secondary structure		T		S														G	G	G		S									T	T	S	T	T	G	G	G	G	G	S																								S	S	S	S	S										S
Template Predicted Secondary structure
Template SS confidence
		317	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.	.	.	.
		73	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.																												.	.	.	100	.	.	.	.	.				.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.
Predicted Secondary structure																										.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.										.	.	.
Query SS confidence																										.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.										.	.	.
Query Sequence		Q	A	S	S	E	L	G	E	L	K	R	Y	V	E	N	G	E	F	L	I	E	A	S	D	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	L	G	V	V	N	M	C	A	E	.	.	.	R	K	L	P	F	V	A	G	H	A	L	N	C	Y	N	A	V
Query Conservation																										.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.										.	.	.
Alig confidence																										.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.										.	.	.											.	.
Template Conservation																																																																											.	.
Template Sequence		N	Q	E	Q	K	K	E	I	A	D	V	L	L	E	T	N	I	D	G	M	I	I	S	N	T	T	T	Q	I	N	D	I	K	S	F	E	N	K	K	G	G	V	S	G	A	K	L	K	D	I	S	T	K	F	I	C	E	M	Y	N	Y	T	N	K	Q	I	P	I	I	A	S	G	G	.	.	I	F	S	G	L
Template Known Secondary structure																T	T		S								B	S						G	G	G	T	T			S																						T	T	T		S						S	S	.	.			S
Template Predicted Secondary structure																																																																											.	.
Template SS confidence
		435	.	.	.	.	440	.	.	.	.	.	.	.	.	.	450	.	.	.	.	.	.	.	.	.	460	.	.	.	.	.	.	.	.	.	470	.	.	.	.	.	.	.	.	.	480	.	.	.	.	.	.	.	.	.	490	.	.	.	.	.	.	.	.	.	500	.	.	.	.	.	.	.			.	.	510	.	.
		123	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.
Predicted Secondary structure
Query SS confidence
Query Sequence		T	L	K	I	L	L	K	Q	G	M	M	R	W	C	M	P	V	E	L
Query Conservation
Alig confidence
Template Conservation
Template Sequence		D	A	L	E	K	I	E	A	G	A	S	V	C	Q	L	Y	S	C	L
Template Known Secondary structure									T	T							S
Template Predicted Secondary structure
Template SS confidence
		513	.	.	.	.	.	.	520	.	.	.	.	.	.	.	.	.	530	.

No model constructed - rank, confidence too low

---

Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions