Return to main results Retrieve Phyre Job Id

Job DescriptionP45475
Confidence77.67%DateThu Jan 5 12:02:49 GMT 2012
Rank232Aligned Residues121
% Identity12%Templatec1nvmG_
PDB info PDB header:lyase/oxidoreductaseChain: G: PDB Molecule:4-hydroxy-2-oxovalerate aldolase; PDBTitle: crystal structure of a bifunctional aldolase-dehydrogenase :2 sequestering a reactive and volatile intermediate
Resolution1.70 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   8.10.........20.........30.........40.........50.........60........ .70.........80.....
Predicted Secondary structure 


























..





Query SS confidence 




























































. .
















Query Sequence  VLWYWPKETLEEFYQQAATSSADVIYLGEAVCSKRRATKVGDWLEMAKSLAGSGKQIVLST. . LALVQASSELGELKRYV
Query Conservation      

      


  
   






      
  
   
  
     
  



 
  ..  

    
   
  
 
Alig confidence 
















.










......

























..
















Template Conservation              
  
 .  
   
 
  ......           
  

  
  
                       
Template Sequence  TLLLPGIGSVHDLKNAY. QAGARVVRVAT. . . . . . HCTEADVSKQHIEYARNLGMDTVGFLMMSHMIPAEKLAEQGKLME
Template Known Secondary structure 
BTTB
.T

......TT
GGGGTT
TGGGS
Template Predicted Secondary structure 




.



......









Template SS confidence 















































































   87..90.........100... ......110.... .....120.........130.........140.........150.........
 
   86...90....... ..100..... ....110 .........120.........130........
Predicted Secondary structure 





.............



....







Query SS confidence 











. . . . . . . . . .







. . .




. . . .



























Query Sequence  ENGEFLIEASDL. . . . . . . . . . GVVNMCAE. . . RKLPF. . . . VAGHALNCYNAVTLKILLKQGMMRWCMP
Query Conservation 
 
 
 


 
 ..........
       ...   
 ....
     

 
      
   
  




Alig confidence 











..........







...




....













...










Template Conservation    


 
 
 

 
   
     

  
         
  
 


 


 

 


...
 


  

 
Template Sequence  SYGATCIYMADSGGAMSMNDIRDRMRAFKAVLKPETQVGMHAHHNLSLGVANSIVA. . . VEEGCDRVDAS
Template Known Secondary structure  T
S
TTS


S
TTS
B
TTS
...TT

B
Template Predicted Secondary structure 




















...




Template SS confidence 





































































   160.........170.........180.........190.........200.........210..... ....220......
 
Download:Text version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
Disclaimer
Terms and Conditions