Return to main results Retrieve Phyre Job Id

Job DescriptionP45475
Confidence87.46%DateThu Jan 5 12:02:49 GMT 2012
Rank132Aligned Residues142
% Identity10%Templatec1jpkA_
PDB info PDB header:lyaseChain: A: PDB Molecule:uroporphyrinogen decarboxylase; PDBTitle: gly156asp mutant of human urod, human uroporphyrinogen iii2 decarboxylase
Resolution2.20 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   14.....20.........30.........40... ......50.........60.........70....... ..80.......
Predicted Secondary structure 















.....












.
Query SS confidence 





























. . . . .

































.









Query Sequence  KETLEEFYQQAATSSADVIYLGEAVCSKRR. . . . . ATKVGDWLEMAKSLAGSGKQIVLSTLALVQASSE. LGELKRYVEN
Query Conservation        


  
   






      
 ..... 
   
  
     
  



 
    

    
.   
  
 
 
Alig confidence 





























.....

































.









Template Conservation              
 


 
   
     


  
 

  
  
 
   
             


 

     
      
Template Sequence  TDALVPYLVGQVVAGAQALQLFESHAGHLGPQLFNKFALPYIRDVAKQVKARLREAGLAPVPMIIFAKDGHFALEELAQA
Template Known Secondary structure  TT
STTGGGS
TTT




TT
GGGTTS
Template Predicted Secondary structure 
























Template SS confidence 















































































   196...200.........210.........220.........230.........240.........250.........260.........270.....
 
   88.90..... ....100.........110.........120. ........130..... ....140.........150.
Predicted Secondary structure 



...







.......



......




Query SS confidence 







. . .

























. . . . . . .













. . . . . .















Query Sequence  GEFLIEAS. . . DLGVVNMCAERKLPFVAGHALNCYNA. . . . . . . VTLKILLKQGMMRW. . . . . . CMPVELSRDWLVNLLN
Query Conservation 
 
 


 ...
 
          
 
     

 
 .......     
   
  

......


 


  

  
  
Alig confidence 







...

























.......













......















Template Conservation 
      
   

 
     
    
 




 

 

 


   
   
      
 

  

 
   

 


 
 
 
Template Sequence  GYEVVGLDWTVAPKKARECVGKTVTLQGNLDPCALYASEEEIGQLVKQMLDDFGPHRYIANLGHGLYPDMDPEHVGAFVD
Template Known Secondary structure  S
S
TTS

SSS
GGGGGS

SSSSS


TT

Template Predicted Secondary structure 

































Template SS confidence 















































































   276...280.........290.........300.........310.........320.........330.........340.........350.....
 
   152...
Predicted Secondary structure 


Query SS confidence 



Query Sequence  QCDE
Query Conservation      
Alig confidence 



Template Conservation 

  
Template Sequence  AVHK
Template Known Secondary structure 
Template Predicted Secondary structure 
Template SS confidence 



   356...
 
Download:Text version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
Disclaimer
Terms and Conditions