Return to main results Retrieve Phyre Job Id

Job DescriptionP45475
Confidence87.14%DateThu Jan 5 12:02:49 GMT 2012
Rank137Aligned Residues56
% Identity16%Templatec1hvxA_
PDB info PDB header:hydrolaseChain: A: PDB Molecule:alpha-amylase; PDBTitle: bacillus stearothermophilus alpha-amylase
Resolution2.00 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   10.........20..... ....30.........40...... ...50......
Predicted Secondary structure 






.......















..........................
Query SS confidence 















. . . . . . .




















. . . . . . . . . . . . . . . . . . . . . . . . . .









Query Sequence  WYWPKETLEEFYQQAA. . . . . . . TSSADVIYLGEAVCSKRRATK. . . . . . . . . . . . . . . . . . . . . . . . . . VGDWLEMAKS
Query Conservation    

      


  
.......   






      
  
 ..........................  
  
    
Alig confidence 















.......








.










..........................









Template Conservation 
             
  




  







. 

         

   
 
          

   

  

  

  
Template Sequence  FEWYLPDDGTLWTKVANEANNLSSLGITALWL. PPAYKGTSRSDVGYGVYDLYDLGEFNQKGAVRTKYGTKAQYLQAIQA
Template Known Secondary structure 

TT

SSS
TT

.


SSSTT

SSSTT
SS
S
BTTBSS
SS

Template Predicted Secondary structure 











.




































Template SS confidence 















































































   12.......20.........30.........40... ......50.........60.........70.........80.........90
 
   57..60......
Predicted Secondary structure 


Query SS confidence 









Query Sequence  LAGSGKQIVL
Query Conservation   
  



 
Alig confidence 









Template Conservation 

  

 


Template Sequence  AHAAGMQVYA
Template Known Secondary structure  TT
Template Predicted Secondary structure 


Template SS confidence 









   91........100
 
Download:Text version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
Disclaimer
Terms and Conditions