Job Description P45475 Confidence 62.60% Date Thu Jan 5 12:02:49 GMT 2012 Rank 325 Aligned Residues 95 % Identity 8% Template c1djnB_ PDB info PDB header:oxidoreductase Chain: B: PDB Molecule:trimethylamine dehydrogenase; PDBTitle: structural and biochemical characterization of recombinant wild type2 trimethylamine dehydrogenase from methylophilus methylotrophus (sp.3 w3a1) Resolution 2.20 Å

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		1	.	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.													.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.
Predicted Secondary structure																																																.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence																																																.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		M	K	Y	S	L	G	P	V	L	W	Y	W	P	K	E	T	L	E	E	F	Y	Q	Q	A	A	T	S	S	A	D	V	I	Y	L	G	E	A	V	C	S	K	R	R	A	T	K	.	.	.	.	.	.	.	.	.	.	.	.	V	G	D	W	L	E	M	A	K	S	L	A	G	S	G	K	Q	I	V	L	S	T
Query Conservation																																																.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence																																																.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		Y	Q	V	P	H	C	I	G	A	G	S	D	K	P	G	F	Q	S	A	H	R	S	V	K	A	E	G	G	W	A	A	L	N	T	E	Y	C	S	I	N	P	E	S	D	D	T	H	R	L	S	A	R	I	W	D	E	G	D	V	R	N	L	K	A	M	T	D	E	V	H	K	Y	G	A	L	A	G	V	E	L
Template Known Secondary structure									S		T	T	T															T	T		S									S	S	T	T	S			T	T	S						S	S																	T	T
Template Predicted Secondary structure
Template SS confidence
		25	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.
		69																															70	.	.	.	.	.	.	.	.	.	80	.	.	.									.	.	.	.	.	.	90	.	.	.	.	.
Predicted Secondary structure			.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.															.	.	.	.	.	.	.	.
Query SS confidence			.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.															.	.	.	.	.	.	.	.
Query Sequence		L	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	A	L	V	Q	A	S	S	E	L	G	E	L	K	R	.	.	.	.	.	.	.	.	Y	V	E	N	G	E	F	L	I	E	A	S
Query Conservation			.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.															.	.	.	.	.	.	.	.
Alig confidence			.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.															.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		W	Y	G	G	A	H	A	P	N	M	E	S	R	A	T	P	R	G	P	S	Q	Y	A	S	E	F	E	T	L	S	Y	C	K	E	M	D	L	S	D	I	A	Q	V	Q	Q	F	Y	V	D	A	A	K	R	S	R	D	A	G	F	D	I	V	Y	V	Y
Template Known Secondary structure					G	G	G	S			T	T	T							S	S			B		S	S	S	T	T		B																										T	T		S
Template Predicted Secondary structure
Template SS confidence
		105	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions