Return to main results Retrieve Phyre Job Id

Job DescriptionP77546
Confidence99.51%DateThu Jan 5 12:30:26 GMT 2012
Rank19Aligned Residues171
% Identity15%Templated1ixza_
SCOP infoP-loop containing nucleoside triphosphate hydrolases P-loop containing nucleoside triphosphate hydrolases Extended AAA-ATPase domain
Resolution2.20

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   6970.........80.........90....... ..100.........110.........120.........130.........140.
Predicted Secondary structure 








.......














Query SS confidence 




























. . . . . . .











































Query Sequence  RKCSFSNYQVQNEGQRYALSQAKSIADEL. . . . . . . MTGCTNFAFSGKPGTGKNHLAAAIGNRLLKDGQTVIVVTVADVM
Query Conservation     

 
                      .......      


 
  







 


      
  
       
 
Alig confidence 







.



















.......



























...












Template Conservation 
     

. 
 
  
  
   
            
      


 







 

 


   ...             
Template Sequence  PKVTFKDV. AGAEEAKEELKEIVEFLKNPSRFHEMGARIPKGVLLVGPPGVGKTHLARAVAGEA. . . RVPFITASGSDFV
Template Known Secondary structure 
S

GGG
.
S

TT



S

TTSST...T

Template Predicted Secondary structure 



.


















...










Template SS confidence 















































































   151....... .160.........170.........180.........190.........200.........210... ......220......
 
   142.......150.........160.........170.........180.........190.... .....200.........210.......
Predicted Secondary structure 













....






Query SS confidence 




















































. . . .






















Query Sequence  SALHASYDDGQSGEKFLRELCEVDLLVLDEIGIQRETKNEQVVLHQIVDRRTA. . . . SMRSVGMLTNLNYEAMKTLLGER
Query Conservation                          





 
           
  

  
  ....  
  




     
   
   
Alig confidence 




















































....










.....






Template Conservation                   
      

  

 
 
                           

     .....       
Template Sequence  EMFVGVGAARVRDLFETAKRHAPCIVFIDEIDAVGRNDEREQTLNQLLVEMDGFEKDTAIVVMAATNR. . . . . PDILDPA
Template Known Secondary structure  S
TTTTSSST

T

TT

S
.....GGGS
GG
Template Predicted Secondary structure 






















.....


Template SS confidence 















































































   227..230.........240.........250.........260.........270.........280.........290.... .....300.
 
   218.220.........230.........240........
Predicted Secondary structure 






Query SS confidence 






























Query Sequence  IMDRMTMNGGRWVNFNWESWRPNVVQPGIAK
Query Conservation 
 


       
   
 
 
          
Alig confidence 






























Template Conservation       
    
    
    
  
    
  
Template Sequence  LLRPGRFDRQIAIDAPDVKGREQILRIHARG
Template Known Secondary structure  GGSTTSS


S

TT
Template Predicted Secondary structure 











Template SS confidence 






























   311........320.........330.........340.
 
Download:Text version FASTA pairwise alignment 3D Model in PDB format

View in Jmol

Send structure to FirstGlance for more viewing options


Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
Disclaimer
Terms and Conditions