Job Description P77546 Confidence 99.51% Date Thu Jan 5 12:30:26 GMT 2012 Rank 18 Aligned Residues 154 % Identity 21% Template c3pfiB_ PDB info PDB header:hydrolase Chain: B: PDB Molecule:holliday junction atp-dependent dna helicase ruvb; PDBTitle: 2.7 angstrom resolution crystal structure of a probable holliday2 junction dna helicase (ruvb) from campylobacter jejuni subsp. jejuni3 nctc 11168 in complex with adenosine-5'-diphosphate Resolution 2.69 Å

Show / Hide SS confidence

Show / Hide Conservation and Alignment quality

		72	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.
Predicted Secondary structure
Query SS confidence
Query Sequence		S	F	S	N	Y	Q	V	Q	N	E	G	Q	R	Y	A	L	S	Q	A	K	S	I	A	D	E	L	M	T	G	C	T	N	F	A	F	S	G	K	P	G	T	G	K	N	H	L	A	A	A	I	G	N	R	L	L	K	D	G	Q	T	V	I	V	V	T	V	A	D	V	M	S	A	L	H	A	S	Y	D	D	G
Query Conservation
Alig confidence							.																																																	.	.	.													.	.	.	.	.	.	.	.
Template Conservation							.																																																	.	.	.													.	.	.	.	.	.	.	.
Template Sequence		N	F	D	G	Y	.	I	G	Q	E	S	I	K	K	N	L	N	V	F	I	A	A	A	K	K	R	N	E	C	L	D	H	I	L	F	S	G	P	A	G	L	G	K	T	T	L	A	N	I	I	S	Y	E	X	.	.	.	S	A	N	I	K	T	T	A	A	P	X	I	.	.	.	.	.	.	.	.	E	K	S
Template Known Secondary structure			S	T	T		.		S																		T	T										S	S	T	T	S	S												T	.	.	.	T								G	G	G		.	.	.	.	.	.	.	.		S	S
Template Predicted Secondary structure							.																																																	.	.	.													.	.	.	.	.	.	.	.
Template SS confidence
		24	.	.	.	.		.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.				.	.	.	80	.	.	.	.	.	.	.	.									.	90	.
		152	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.
Predicted Secondary structure
Query SS confidence
Query Sequence		Q	S	G	E	K	F	L	R	E	L	C	E	V	D	L	L	V	L	D	E	I	G	I	Q	R	E	T	K	N	E	Q	V	V	L	H	Q	I	V	D	R	R	T	A	S	M	R	S	V	G	M	L	T	N	L	N	Y	E	A	M	K	T	L	L	G	E	R	I	M	D	R	M	T	M	N	G	G	R	W	V	N
Query Conservation
Alig confidence																										.	.																.	.															.	.	.	.	.										.	.
Template Conservation																										.	.																.	.															.	.	.	.	.										.	.
Template Sequence		G	D	L	A	A	I	L	T	N	L	S	E	G	D	I	L	F	I	D	E	I	H	R	L	.	.	S	P	A	I	E	E	V	L	Y	P	A	X	E	D	Y	.	.	P	K	F	T	L	I	G	A	T	T	R	A	G	X	.	.	.	.	.	L	S	N	P	L	R	D	R	F	.	.	G	X	Q	F	R	L	E
Template Known Secondary structure										T			T	T							S	G	G	G		.	.														T		.	.										S		G	G	G	.	.	.	.	.	S						T	T		.	.	S
Template Predicted Secondary structure																										.	.																.	.															.	.	.	.	.										.	.
Template SS confidence
		92	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.			.	.	.	.	120	.	.	.	.	.	.	.	.	.	130			.	.	.	.	.	.	.	.	.	140	.	.	.	.						.	.	.	.	.	150	.	.	.			.	.	.	.	.	.	160
		232	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		F	N	W	E	S	W	R	P	N	V	V	Q	P	G	I	A	K
Query Conservation
Alig confidence
Template Conservation
Template Sequence		F	Y	K	D	S	E	L	A	L	I	L	Q	K	A	A	L	K
Template Known Secondary structure
Template Predicted Secondary structure
Template SS confidence
		180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.

---

Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions