Job Description P77546 Confidence 99.43% Date Thu Jan 5 12:30:26 GMT 2012 Rank 24 Aligned Residues 175 % Identity 18% Template c3h4mC_ PDB info PDB header:hydrolase Chain: C: PDB Molecule:proteasome-activating nucleotidase; PDBTitle: aaa atpase domain of the proteasome- activating nucleotidase Resolution 3.11 Å

Show / Hide SS confidence

Show / Hide Conservation and Alignment quality

		66	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.								.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.
Predicted Secondary structure																												.	.	.	.	.	.	.
Query SS confidence																												.	.	.	.	.	.	.
Query Sequence		P	L	H	R	K	C	S	F	S	N	Y	Q	V	Q	N	E	G	Q	R	Y	A	L	S	Q	A	K	.	.	.	.	.	.	.	S	I	A	D	E	L	M	T	G	C	T	N	F	A	F	S	G	K	P	G	T	G	K	N	H	L	A	A	A	I	G	N	R	L	L	K	D	G	Q	T	V	I	V	V	T	V	A
Query Conservation																												.	.	.	.	.	.	.
Alig confidence																												.	.	.	.	.	.	.																																			.	.	.
Template Conservation																																																																					.	.	.
Template Sequence		D	E	R	P	N	V	R	Y	E	D	I	G	G	L	E	K	Q	M	Q	E	I	R	E	V	V	E	L	P	L	K	H	P	E	L	F	E	K	V	G	I	E	P	P	K	G	I	L	L	Y	G	P	P	G	T	G	K	T	L	L	A	K	A	V	A	T	E	T	.	.	.	N	A	T	F	I	R	V	V	G	S
Template Known Secondary structure			S	S					G	G	G			S										T	T	T	T													T					S						S	S	S	S	S	S												T	.	.	.	T								G	G
Template Predicted Secondary structure																																																																					.	.	.
Template SS confidence
		162	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.				.	230	.	.	.	.	.	.	.	.
		139	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.													.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.		.	.	.	.
Predicted Secondary structure																																						.	.	.	.	.	.	.	.	.	.	.	.																												.
Query SS confidence																																						.	.	.	.	.	.	.	.	.	.	.	.																												.
Query Sequence		D	V	M	S	A	L	H	A	S	Y	D	D	G	Q	S	G	E	K	F	L	R	E	L	C	E	V	D	L	L	V	L	D	E	I	G	I	.	.	.	.	.	.	.	.	.	.	.	.	Q	R	E	T	K	N	E	Q	V	V	L	H	Q	I	V	D	R	R	T	A	S	M	R	S	V	G	M	.	L	T	N	L
Query Conservation																																						.	.	.	.	.	.	.	.	.	.	.	.																												.
Alig confidence																																						.	.	.	.	.	.	.	.	.	.	.	.																												.
Template Conservation
Template Sequence		E	L	V	K	K	F	I	G	E	G	A	S	L	V	K	D	I	F	K	L	A	K	E	K	A	P	S	I	I	F	I	D	E	I	D	A	I	A	A	K	R	T	D	A	L	T	G	G	D	R	E	V	Q	R	T	L	M	Q	L	L	A	E	M	D	G	F	D	A	R	G	D	V	K	I	I	G	A	T	N	R
Template Known Secondary structure		G	S				S	T	T	T	T	T													T		S								G	G	G	T	S	B			S	S	S				S	T														T	T	S	S		S	S	S	S								S	S
Template Predicted Secondary structure
Template SS confidence
		239	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.
		206	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		N	Y	E	A	M	K	T	L	L	G	E	R	I	M	D	R	M	T	M	N	G	G	R	W	V	N	F	N	W	E	S	W	R	P	N	V	V	Q	P	G	I	A	K
Query Conservation
Alig confidence		.	.	.	.	.
Template Conservation		.	.	.	.	.
Template Sequence		.	.	.	.	.	P	D	I	L	D	P	A	I	L	R	P	G	R	F	D	R	I	I	E	V	P	A	P	D	E	K	G	R	L	E	I	L	K	I	H	T	R	K
Template Known Secondary structure		.	.	.	.	.	G	G	G	B						S	T	T	S																						T	T	T	T
Template Predicted Secondary structure		.	.	.	.	.
Template SS confidence
							319	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.

No model constructed - rank, confidence too low

---

Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions